Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT20P35900 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.5■□□□□ 0.87
KRT20P35900 pRNA.6-201ENST00000610482 90 ntBASIC20.5■□□□□ 0.87
KRT20P35900 pRNA.5-201ENST00000612139 90 ntBASIC20.5■□□□□ 0.87
KRT20P35900 pRNA.11-201ENST00000618423 90 ntBASIC20.5■□□□□ 0.87
KRT20P35900 pRNA.13-201ENST00000619112 90 ntBASIC20.5■□□□□ 0.87
KRT20P35900 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT20P35900 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT20P35900 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT20P35900 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
KRT20P35900 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
KRT20P35900 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 AC006455.2-201ENST00000429931 906 ntBASIC20.49■□□□□ 0.87
KRT20P35900 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT20P35900 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
KRT20P35900 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT20P35900 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT20P35900 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT20P35900 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT20P35900 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KRT20P35900 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
KRT20P35900 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT20P35900 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT20P35900 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.48■□□□□ 0.87
KRT20P35900 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.48■□□□□ 0.87
KRT20P35900 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT20P35900 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT20P35900 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
KRT20P35900 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT20P35900 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT20P35900 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT20P35900 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT20P35900 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT20P35900 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.47■□□□□ 0.87
KRT20P35900 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 AL138724.1-201ENST00000606771 1088 ntBASIC20.47■□□□□ 0.87
KRT20P35900 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT20P35900 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT20P35900 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
KRT20P35900 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KRT20P35900 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KRT20P35900 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
KRT20P35900 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.46■□□□□ 0.87
KRT20P35900 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
KRT20P35900 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.46■□□□□ 0.87
KRT20P35900 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRT20P35900 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
KRT20P35900 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT20P35900 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT20P35900 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT20P35900 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
KRT20P35900 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT20P35900 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT20P35900 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.45■□□□□ 0.86
KRT20P35900 MIR3181-201ENST00000578512 73 ntBASIC20.45■□□□□ 0.86
KRT20P35900 AL499627.2-201ENST00000606283 725 ntBASIC20.45■□□□□ 0.86
KRT20P35900 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
KRT20P35900 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
KRT20P35900 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT20P35900 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
KRT20P35900 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT20P35900 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT20P35900 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT20P35900 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT20P35900 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT20P35900 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT20P35900 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT20P35900 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT20P35900 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.44■□□□□ 0.86
KRT20P35900 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT20P35900 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT20P35900 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT20P35900 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT20P35900 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.44■□□□□ 0.86
KRT20P35900 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms