Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.032e-6■■■□□ 18.4
CSTF2P33240 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.53□□□□□ -0.082e-6■■■□□ 18.4
CSTF2P33240 SUN1-232ENST00000483996 478 ntTSL 214.28□□□□□ -0.122e-6■■■□□ 18.4
CSTF2P33240 KDM4B-212ENST00000624683 5076 nt13.98□□□□□ -0.172e-8■■■□□ 18.4
CSTF2P33240 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.22e-6■■■□□ 18.4
CSTF2P33240 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.252e-6■■■□□ 18.4
CSTF2P33240 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-6■■■□□ 18.4
CSTF2P33240 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.31□□□□□ -0.282e-6■■■□□ 18.4
CSTF2P33240 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.312e-6■■■□□ 18.4
CSTF2P33240 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.312e-6■■■□□ 18.4
CSTF2P33240 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.28□□□□□ -0.443e-12■■■□□ 18.4
CSTF2P33240 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.09□□□□□ -0.473e-12■■■□□ 18.4
CSTF2P33240 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.85□□□□□ -0.513e-12■■■□□ 18.4
CSTF2P33240 RNF146-207ENST00000489534 610 ntTSL 311.54□□□□□ -0.562e-6■■■□□ 18.4
CSTF2P33240 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.632e-6■■■□□ 18.4
CSTF2P33240 RASGRF2-203ENST00000503795 3837 ntTSL 1 (best)11.03□□□□□ -0.642e-6■■■□□ 18.4
CSTF2P33240 SRP9-202ENST00000366838 540 ntTSL 2 BASIC11.02□□□□□ -0.652e-6■■■□□ 18.4
CSTF2P33240 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC11.02□□□□□ -0.653e-12■■■□□ 18.4
CSTF2P33240 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC10.98□□□□□ -0.653e-12■■■□□ 18.4
CSTF2P33240 CUX1-218ENST00000560541 3176 ntTSL 510.71□□□□□ -0.692e-6■■■□□ 18.4
CSTF2P33240 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC10.67□□□□□ -0.72e-6■■■□□ 18.4
CSTF2P33240 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC10.63□□□□□ -0.712e-6■■■□□ 18.4
CSTF2P33240 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.713e-12■■■□□ 18.4
CSTF2P33240 RNF146-202ENST00000356799 2267 ntTSL 2 BASIC10.56□□□□□ -0.722e-6■■■□□ 18.4
CSTF2P33240 GLE1-202ENST00000372770 2218 ntTSL 1 (best) BASIC10.45□□□□□ -0.742e-6■■■□□ 18.4
CSTF2P33240 SRP9-205ENST00000626563 329 ntTSL 5 BASIC10.26□□□□□ -0.772e-6■■■□□ 18.4
CSTF2P33240 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.25□□□□□ -0.772e-6■■■□□ 18.4
CSTF2P33240 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC10.03□□□□□ -0.82e-6■■■□□ 18.4
CSTF2P33240 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC9.88□□□□□ -0.832e-6■■■□□ 18.4
CSTF2P33240 CUX1-217ENST00000558836 2965 ntTSL 59.88□□□□□ -0.832e-6■■■□□ 18.4
CSTF2P33240 TRIO-224ENST00000620511 1547 ntTSL 2 BASIC9.2□□□□□ -0.942e-6■■■□□ 18.4
CSTF2P33240 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.992e-6■■■□□ 18.4
CSTF2P33240 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.82□□□□□ -12e-6■■■□□ 18.4
CSTF2P33240 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC7.88□□□□□ -1.152e-6■■■□□ 18.4
CSTF2P33240 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.182e-6■■■□□ 18.4
CSTF2P33240 DISC1-208ENST00000427560 545 ntTSL 37.54□□□□□ -1.22e-6■■■□□ 18.4
CSTF2P33240 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.29□□□□□ -1.242e-6■■■□□ 18.4
CSTF2P33240 TFPI-211ENST00000481132 7690 ntTSL 26.73□□□□□ -1.335e-6■■■□□ 18.4
CSTF2P33240 ANKRD37-206ENST00000511393 1444 ntTSL 26.69□□□□□ -1.342e-6■■■□□ 18.4
CSTF2P33240 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.362e-6■■■□□ 18.4
CSTF2P33240 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.392e-6■■■□□ 18.4
CSTF2P33240 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.412e-6■■■□□ 18.4
CSTF2P33240 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.422e-6■■■□□ 18.4
CSTF2P33240 RNF146-208ENST00000495188 593 ntTSL 25.02□□□□□ -1.612e-6■■■□□ 18.4
CSTF2P33240 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.765e-6■■■□□ 18.4
CSTF2P33240 TFPI-208ENST00000435414 687 ntTSL 53.75□□□□□ -1.815e-6■■■□□ 18.4
CSTF2P33240 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.11e-6■■■□□ 18.4
CSTF2P33240 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)10.45□□□□□ -0.741e-6■■■□□ 18.4
CSTF2P33240 TAS2R14-201ENST00000381852 1662 ntTSL 211.75□□□□□ -0.532e-6■■■□□ 18.4
CSTF2P33240 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.833e-10■■■□□ 18.4
CSTF2P33240 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.93■□□□□ 0.624e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.32■□□□□ 0.524e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.19■□□□□ 0.344e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.67■□□□□ 0.264e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.87□□□□□ -0.994e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.46□□□□□ -1.064e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.064e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.03□□□□□ -1.124e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.154e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.48□□□□□ -1.214e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.98□□□□□ -1.294e-7■■■□□ 18.4
CSTF2P33240 MAP4K4-207ENST00000417294 4251 ntTSL 56.36□□□□□ -1.394e-7■■■□□ 18.4
CSTF2P33240 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.423e-6■■■□□ 18.3
CSTF2P33240 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.513e-6■■■□□ 18.3
CSTF2P33240 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.06■□□□□ 0.965e-9■■■□□ 18.3
CSTF2P33240 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.322e-6■■■□□ 18.3
CSTF2P33240 BIRC6-209ENST00000471232 4226 ntTSL 26.14□□□□□ -1.432e-6■■■□□ 18.3
CSTF2P33240 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.053e-6■■■□□ 18.3
CSTF2P33240 BMP2K-202ENST00000389010 2741 ntTSL 1 (best)19.22■□□□□ 0.673e-6■■■□□ 18.3
CSTF2P33240 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.353e-6■■■□□ 18.3
CSTF2P33240 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.13e-6■■■□□ 18.3
CSTF2P33240 MBNL1-207ENST00000459747 594 ntTSL 415.02■□□□□ -04e-7■■■□□ 18.3
CSTF2P33240 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.088e-9■■■□□ 18.3
CSTF2P33240 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.9■■■□□ 2.223e-6■■■□□ 18.3
CSTF2P33240 CYHR1-206ENST00000526887 1012 ntTSL 317.06■□□□□ 0.323e-6■■■□□ 18.3
CSTF2P33240 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.23e-6■■■□□ 18.3
CSTF2P33240 CYHR1-208ENST00000528663 5821 ntTSL 1 (best)14.61□□□□□ -0.073e-6■■■□□ 18.3
CSTF2P33240 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.441e-6■■■□□ 18.3
CSTF2P33240 GREB1-210ENST00000628795 438 ntTSL 54.76□□□□□ -1.655e-6■■■□□ 18.3
CSTF2P33240 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.71□□□□□ -1.52e-7■■■□□ 18.3
CSTF2P33240 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.91■■□□□ 1.262e-6■■■□□ 18.2
CSTF2P33240 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.812e-6■■■□□ 18.2
CSTF2P33240 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.52■□□□□ 0.722e-6■■■□□ 18.2
CSTF2P33240 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.672e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-212ENST00000575558 1527 ntTSL 218.27■□□□□ 0.512e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.312e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-206ENST00000571894 561 ntTSL 416.54■□□□□ 0.242e-6■■■□□ 18.2
CSTF2P33240 AC010186.2-202ENST00000545363 805 ntTSL 1 (best)16.02■□□□□ 0.164e-12■■■□□ 18.2
CSTF2P33240 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.122e-6■■■□□ 18.2
CSTF2P33240 ATP9B-220ENST00000590163 528 ntTSL 315.73■□□□□ 0.112e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-210ENST00000574251 545 ntTSL 415.72■□□□□ 0.112e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.06■□□□□ 02e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-211ENST00000574692 1214 ntTSL 214.51□□□□□ -0.092e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-204ENST00000570698 1910 ntTSL 1 (best)13.66□□□□□ -0.222e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.232e-6■■■□□ 18.2
CSTF2P33240 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.252e-6■■■□□ 18.2
CSTF2P33240 PPP1R3F-204ENST00000471261 503 ntTSL 312.37□□□□□ -0.432e-6■■■□□ 18.2
CSTF2P33240 ACSM2A-216ENST00000576361 556 ntTSL 312.31□□□□□ -0.442e-6■■■□□ 18.2
CSTF2P33240 AC010186.2-203ENST00000574035 587 ntTSL 511.44□□□□□ -0.584e-12■■■□□ 18.2
CSTF2P33240 MAP3K7-204ENST00000369329 4911 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.672e-6■■■□□ 18.2
Retrieved 100 of 6,735 protein–RNA pairs in 55.8 ms