Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.44■□□□□ 0.7
CTSSP25774 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSSP25774 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSSP25774 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.44■□□□□ 0.7
CTSSP25774 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSSP25774 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTSSP25774 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSSP25774 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSSP25774 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSSP25774 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTSSP25774 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSSP25774 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSSP25774 AC010141.3-201ENST00000456659 717 ntBASIC19.43■□□□□ 0.7
CTSSP25774 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
CTSSP25774 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSSP25774 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSSP25774 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTSSP25774 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSSP25774 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSSP25774 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSSP25774 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.42■□□□□ 0.7
CTSSP25774 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 AL137784.2-201ENST00000607332 1000 ntBASIC19.42■□□□□ 0.7
CTSSP25774 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSSP25774 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSSP25774 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSSP25774 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSSP25774 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSSP25774 IKBKGP1-201ENST00000612193 1073 ntBASIC19.41■□□□□ 0.7
CTSSP25774 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSSP25774 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSSP25774 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTSSP25774 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.4■□□□□ 0.7
CTSSP25774 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSSP25774 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSSP25774 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.4■□□□□ 0.7
CTSSP25774 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.4■□□□□ 0.7
CTSSP25774 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTSSP25774 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSSP25774 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSSP25774 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.4■□□□□ 0.7
CTSSP25774 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSSP25774 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CTSSP25774 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTSSP25774 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CTSSP25774 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.39■□□□□ 0.69
CTSSP25774 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.39■□□□□ 0.69
CTSSP25774 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTSSP25774 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.39■□□□□ 0.69
CTSSP25774 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CTSSP25774 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTSSP25774 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTSSP25774 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTSSP25774 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTSSP25774 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTSSP25774 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.38■□□□□ 0.69
CTSSP25774 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.38■□□□□ 0.69
CTSSP25774 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTSSP25774 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTSSP25774 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.38■□□□□ 0.69
CTSSP25774 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CTSSP25774 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms