Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.34■□□□□ 0.53
COL8A2P25067 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.34■□□□□ 0.53
COL8A2P25067 NTF6G-201ENST00000591094 616 ntBASIC18.34■□□□□ 0.53
COL8A2P25067 AC022517.1-201ENST00000592429 346 ntBASIC18.34■□□□□ 0.53
COL8A2P25067 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL8A2P25067 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
COL8A2P25067 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.34■□□□□ 0.53
COL8A2P25067 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
COL8A2P25067 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.53
COL8A2P25067 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.33■□□□□ 0.53
COL8A2P25067 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL8A2P25067 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.33■□□□□ 0.53
COL8A2P25067 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COL8A2P25067 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COL8A2P25067 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL8A2P25067 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
COL8A2P25067 IKBKGP1-201ENST00000612193 1073 ntBASIC18.33■□□□□ 0.52
COL8A2P25067 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL8A2P25067 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL8A2P25067 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL8A2P25067 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.33■□□□□ 0.52
COL8A2P25067 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COL8A2P25067 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL8A2P25067 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.32■□□□□ 0.52
COL8A2P25067 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.32■□□□□ 0.52
COL8A2P25067 TPRG1LP1-201ENST00000598702 760 ntBASIC18.32■□□□□ 0.52
COL8A2P25067 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.32■□□□□ 0.52
COL8A2P25067 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL8A2P25067 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
COL8A2P25067 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.32■□□□□ 0.52
COL8A2P25067 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL8A2P25067 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL8A2P25067 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.31■□□□□ 0.52
COL8A2P25067 LINC01960-201ENST00000563759 1884 ntBASIC18.31■□□□□ 0.52
COL8A2P25067 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COL8A2P25067 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL8A2P25067 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.31■□□□□ 0.52
COL8A2P25067 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
COL8A2P25067 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL8A2P25067 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
COL8A2P25067 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.3■□□□□ 0.52
COL8A2P25067 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL8A2P25067 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL8A2P25067 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.3■□□□□ 0.52
COL8A2P25067 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL8A2P25067 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL8A2P25067 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL8A2P25067 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.3■□□□□ 0.52
COL8A2P25067 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.3■□□□□ 0.52
COL8A2P25067 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.3■□□□□ 0.52
COL8A2P25067 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL8A2P25067 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.3■□□□□ 0.52
COL8A2P25067 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
COL8A2P25067 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL8A2P25067 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL8A2P25067 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL8A2P25067 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COL8A2P25067 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
COL8A2P25067 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.29■□□□□ 0.52
COL8A2P25067 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL8A2P25067 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COL8A2P25067 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL8A2P25067 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.29■□□□□ 0.52
COL8A2P25067 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.29■□□□□ 0.52
COL8A2P25067 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL8A2P25067 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL8A2P25067 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL8A2P25067 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL8A2P25067 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.28■□□□□ 0.52
COL8A2P25067 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.28■□□□□ 0.52
COL8A2P25067 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL8A2P25067 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL8A2P25067 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms