Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCLP18206 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.71■■□□□ 1.07
VCLP18206 AC099791.1-201ENST00000416440 715 ntBASIC21.71■■□□□ 1.07
VCLP18206 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
VCLP18206 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.71■■□□□ 1.07
VCLP18206 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.71■■□□□ 1.07
VCLP18206 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
VCLP18206 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCLP18206 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
VCLP18206 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
VCLP18206 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCLP18206 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCLP18206 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.7■■□□□ 1.06
VCLP18206 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.7■■□□□ 1.06
VCLP18206 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.7■■□□□ 1.06
VCLP18206 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VCLP18206 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VCLP18206 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.7■■□□□ 1.06
VCLP18206 AC004687.1-201ENST00000579003 1625 ntBASIC21.69■■□□□ 1.06
VCLP18206 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
VCLP18206 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.69■■□□□ 1.06
VCLP18206 ECEL1P1-201ENST00000373592 1742 ntBASIC21.69■■□□□ 1.06
VCLP18206 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
VCLP18206 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VCLP18206 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.69■■□□□ 1.06
VCLP18206 SLC47A1P1-202ENST00000449666 945 ntBASIC21.69■■□□□ 1.06
VCLP18206 AC126544.1-201ENST00000580842 1059 ntBASIC21.69■■□□□ 1.06
VCLP18206 CA15P2-201ENST00000611168 834 ntBASIC21.69■■□□□ 1.06
VCLP18206 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.69■■□□□ 1.06
VCLP18206 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.69■■□□□ 1.06
VCLP18206 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCLP18206 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
VCLP18206 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCLP18206 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.68■■□□□ 1.06
VCLP18206 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCLP18206 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCLP18206 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.68■■□□□ 1.06
VCLP18206 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
VCLP18206 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCLP18206 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.68■■□□□ 1.06
VCLP18206 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
VCLP18206 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.68■■□□□ 1.06
VCLP18206 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCLP18206 AL137060.1-201ENST00000618151 2648 ntBASIC21.68■■□□□ 1.06
VCLP18206 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
VCLP18206 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VCLP18206 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VCLP18206 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.67■■□□□ 1.06
VCLP18206 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VCLP18206 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VCLP18206 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
VCLP18206 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCLP18206 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCLP18206 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.66■■□□□ 1.06
VCLP18206 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCLP18206 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
VCLP18206 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.66■■□□□ 1.06
VCLP18206 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.66■■□□□ 1.06
VCLP18206 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.66■■□□□ 1.06
VCLP18206 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCLP18206 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCLP18206 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VCLP18206 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
VCLP18206 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VCLP18206 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 ESRRAP2-201ENST00000418437 1549 ntBASIC21.65■■□□□ 1.06
VCLP18206 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VCLP18206 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VCLP18206 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VCLP18206 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VCLP18206 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.65■■□□□ 1.06
VCLP18206 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VCLP18206 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VCLP18206 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
VCLP18206 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VCLP18206 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
VCLP18206 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms