Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NCK1P16333 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
NCK1P16333 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.45■□□□□ 0.86
NCK1P16333 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
NCK1P16333 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NCK1P16333 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NCK1P16333 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCK1P16333 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCK1P16333 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.44■□□□□ 0.86
NCK1P16333 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.44■□□□□ 0.86
NCK1P16333 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCK1P16333 CA15P2-201ENST00000611168 834 ntBASIC20.44■□□□□ 0.86
NCK1P16333 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCK1P16333 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCK1P16333 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCK1P16333 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 TSPY13P-201ENST00000338964 914 ntBASIC20.43■□□□□ 0.86
NCK1P16333 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 AC103834.1-201ENST00000520383 144 ntBASIC20.43■□□□□ 0.86
NCK1P16333 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.43■□□□□ 0.86
NCK1P16333 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.43■□□□□ 0.86
NCK1P16333 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.43■□□□□ 0.86
NCK1P16333 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.43■□□□□ 0.86
NCK1P16333 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.43■□□□□ 0.86
NCK1P16333 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.43■□□□□ 0.86
NCK1P16333 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCK1P16333 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NCK1P16333 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NCK1P16333 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NCK1P16333 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.42■□□□□ 0.86
NCK1P16333 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
NCK1P16333 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 AL157384.1-201ENST00000445995 2473 ntBASIC20.42■□□□□ 0.86
NCK1P16333 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.42■□□□□ 0.86
NCK1P16333 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
NCK1P16333 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.42■□□□□ 0.86
NCK1P16333 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NCK1P16333 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.42■□□□□ 0.86
NCK1P16333 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 KRT8P33-201ENST00000508125 1423 ntBASIC20.42■□□□□ 0.86
NCK1P16333 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
NCK1P16333 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCK1P16333 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCK1P16333 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCK1P16333 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCK1P16333 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
NCK1P16333 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
NCK1P16333 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.41■□□□□ 0.86
NCK1P16333 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCK1P16333 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.41■□□□□ 0.86
NCK1P16333 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
NCK1P16333 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NCK1P16333 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCK1P16333 FEM1AP4-201ENST00000443167 1987 ntBASIC20.41■□□□□ 0.86
NCK1P16333 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.41■□□□□ 0.86
NCK1P16333 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NCK1P16333 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCK1P16333 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCK1P16333 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCK1P16333 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NCK1P16333 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.4■□□□□ 0.86
NCK1P16333 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.4■□□□□ 0.86
NCK1P16333 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.4■□□□□ 0.86
NCK1P16333 AC103724.3-201ENST00000564481 992 ntBASIC20.4■□□□□ 0.86
NCK1P16333 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.4■□□□□ 0.86
NCK1P16333 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NCK1P16333 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NCK1P16333 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.39■□□□□ 0.86
NCK1P16333 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NCK1P16333 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCK1P16333 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NCK1P16333 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCK1P16333 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCK1P16333 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCK1P16333 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NCK1P16333 AC137630.3-201ENST00000607245 391 ntBASIC20.39■□□□□ 0.85
NCK1P16333 MIR6722-201ENST00000617286 78 ntBASIC20.39■□□□□ 0.85
NCK1P16333 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NCK1P16333 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
NCK1P16333 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NCK1P16333 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NCK1P16333 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.39■□□□□ 0.85
NCK1P16333 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.39■□□□□ 0.85
NCK1P16333 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms