Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
H2AFXP16104 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
H2AFXP16104 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
H2AFXP16104 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
H2AFXP16104 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
H2AFXP16104 CR559946.2-201ENST00000623684 991 ntBASIC22.62■■□□□ 1.21
H2AFXP16104 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.62■■□□□ 1.21
H2AFXP16104 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
H2AFXP16104 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2AFXP16104 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2AFXP16104 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.61■■□□□ 1.21
H2AFXP16104 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.61■■□□□ 1.21
H2AFXP16104 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2AFXP16104 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
H2AFXP16104 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.61■■□□□ 1.21
H2AFXP16104 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
H2AFXP16104 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.61■■□□□ 1.21
H2AFXP16104 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
H2AFXP16104 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.61■■□□□ 1.21
H2AFXP16104 GABARAPL3-202ENST00000624044 1851 ntBASIC22.61■■□□□ 1.21
H2AFXP16104 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2AFXP16104 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2AFXP16104 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
H2AFXP16104 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
H2AFXP16104 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
H2AFXP16104 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.6■■□□□ 1.21
H2AFXP16104 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
H2AFXP16104 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
H2AFXP16104 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
H2AFXP16104 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.6■■□□□ 1.21
H2AFXP16104 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.59■■□□□ 1.21
H2AFXP16104 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.59■■□□□ 1.21
H2AFXP16104 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.59■■□□□ 1.21
H2AFXP16104 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 AC087289.5-201ENST00000586076 3175 ntBASIC22.59■■□□□ 1.21
H2AFXP16104 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.59■■□□□ 1.21
H2AFXP16104 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
H2AFXP16104 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
H2AFXP16104 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2AFXP16104 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
H2AFXP16104 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
H2AFXP16104 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
H2AFXP16104 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
H2AFXP16104 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.58■■□□□ 1.21
H2AFXP16104 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
H2AFXP16104 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
H2AFXP16104 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
H2AFXP16104 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.58■■□□□ 1.21
H2AFXP16104 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.58■■□□□ 1.21
H2AFXP16104 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
H2AFXP16104 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
H2AFXP16104 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.58■■□□□ 1.21
H2AFXP16104 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
H2AFXP16104 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
H2AFXP16104 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
H2AFXP16104 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
H2AFXP16104 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
H2AFXP16104 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
H2AFXP16104 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
H2AFXP16104 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 RPS2P7-201ENST00000447334 885 ntBASIC22.57■■□□□ 1.2
H2AFXP16104 AC007029.1-201ENST00000604183 313 ntBASIC22.57■■□□□ 1.2
H2AFXP16104 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 AP005212.1-201ENST00000581547 1997 ntBASIC22.57■■□□□ 1.2
H2AFXP16104 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.57■■□□□ 1.2
H2AFXP16104 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
H2AFXP16104 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H2AFXP16104 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.56■■□□□ 1.2
H2AFXP16104 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H2AFXP16104 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
H2AFXP16104 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.56■■□□□ 1.2
H2AFXP16104 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H2AFXP16104 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.56■■□□□ 1.2
H2AFXP16104 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H2AFXP16104 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H2AFXP16104 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
H2AFXP16104 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2AFXP16104 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2AFXP16104 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2AFXP16104 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2AFXP16104 CA15P2-201ENST00000611168 834 ntBASIC22.55■■□□□ 1.2
H2AFXP16104 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2AFXP16104 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.55■■□□□ 1.2
H2AFXP16104 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.55■■□□□ 1.2
H2AFXP16104 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms