Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 HMF1YER057C 390 nt2.97□□□□□ -1.93
RPL40BP0CH09 RPB9YGL070C 369 nt2.97□□□□□ -1.93
RPL40BP0CH09 DOG1YHR044C 741 nt2.97□□□□□ -1.93
RPL40BP0CH09 TEM1YML064C 738 nt2.97□□□□□ -1.93
RPL40BP0CH09 NME1NME1 340 nt2.97□□□□□ -1.93
RPL40BP0CH09 BYE1YKL005C 1785 nt2.97□□□□□ -1.93
RPL40BP0CH09 STU2YLR045C 2667 nt2.96□□□□□ -1.93
RPL40BP0CH09 MPC3YGR243W 441 nt2.96□□□□□ -1.94
RPL40BP0CH09 ECM34YHL043W 513 nt2.96□□□□□ -1.94
RPL40BP0CH09 SAW1YAL027W 786 nt2.96□□□□□ -1.94
RPL40BP0CH09 RPL17AYKL180W 555 nt2.96□□□□□ -1.94
RPL40BP0CH09 RPL23AYBL087C 414 nt2.96□□□□□ -1.94
RPL40BP0CH09 RTS1YOR014W 2274 nt2.96□□□□□ -1.94
RPL40BP0CH09 VPS41YDR080W 2979 nt2.96□□□□□ -1.94
RPL40BP0CH09 MRE11YMR224C 2079 nt2.96□□□□□ -1.94
RPL40BP0CH09 POL2YNL262W 6669 nt2.95□□□□□ -1.94
RPL40BP0CH09 YDR222WYDR222W 1248 nt2.95□□□□□ -1.94
RPL40BP0CH09 YAP5YIR018W 738 nt2.95□□□□□ -1.94
RPL40BP0CH09 MAC1YMR021C 1254 nt2.95□□□□□ -1.94
RPL40BP0CH09 RHO5YNL180C 996 nt2.95□□□□□ -1.94
RPL40BP0CH09 SET6YPL165C 1122 nt2.95□□□□□ -1.94
RPL40BP0CH09 HAL1YPR005C 885 nt2.95□□□□□ -1.94
RPL40BP0CH09 CDC9YDL164C 2268 nt2.95□□□□□ -1.94
RPL40BP0CH09 ECM21YBL101C 3354 nt2.95□□□□□ -1.94
RPL40BP0CH09 PTR3YFR029W 2037 nt2.94□□□□□ -1.94
RPL40BP0CH09 CAJ1YER048C 1176 nt2.94□□□□□ -1.94
RPL40BP0CH09 RPL23BYER117W 414 nt2.94□□□□□ -1.94
RPL40BP0CH09 GET1YGL020C 708 nt2.94□□□□□ -1.94
RPL40BP0CH09 TOM20YGR082W 552 nt2.94□□□□□ -1.94
RPL40BP0CH09 GTR1YML121W 933 nt2.94□□□□□ -1.94
RPL40BP0CH09 DIB1YPR082C 432 nt2.94□□□□□ -1.94
RPL40BP0CH09 snR43snR43 209 nt2.94□□□□□ -1.94
RPL40BP0CH09 SMP1YBR182C 1359 nt2.94□□□□□ -1.94
RPL40BP0CH09 TAF6YGL112C 1551 nt2.94□□□□□ -1.94
RPL40BP0CH09 SIZ1YDR409W 2715 nt2.94□□□□□ -1.94
RPL40BP0CH09 FLO5YHR211W 3228 nt2.94□□□□□ -1.94
RPL40BP0CH09 YDL109CYDL109C 1944 nt2.93□□□□□ -1.94
RPL40BP0CH09 TMN2YDR107C 2019 nt2.93□□□□□ -1.94
RPL40BP0CH09 YSP2YDR326C 4317 nt2.93□□□□□ -1.94
RPL40BP0CH09 CSR2YPR030W 3366 nt2.93□□□□□ -1.94
RPL40BP0CH09 SEO1YAL067C 1782 nt2.93□□□□□ -1.94
RPL40BP0CH09 DET1YDR051C 1005 nt2.93□□□□□ -1.94
RPL40BP0CH09 FMP10YER182W 735 nt2.93□□□□□ -1.94
RPL40BP0CH09 DLS1YJL065C 504 nt2.93□□□□□ -1.94
RPL40BP0CH09 RPL18AYOL120C 561 nt2.93□□□□□ -1.94
RPL40BP0CH09 YOR292CYOR292C 930 nt2.93□□□□□ -1.94
RPL40BP0CH09 EPL1YFL024C 2499 nt2.93□□□□□ -1.94
RPL40BP0CH09 YRM1YOR172W 2361 nt2.93□□□□□ -1.94
RPL40BP0CH09 SRS2YJL092W 3525 nt2.92□□□□□ -1.94
RPL40BP0CH09 LAP3YNL239W 1365 nt2.92□□□□□ -1.94
RPL40BP0CH09 VPS64YDR200C 1815 nt2.92□□□□□ -1.94
RPL40BP0CH09 YDR431WYDR431W 312 nt2.92□□□□□ -1.94
RPL40BP0CH09 SPI1YER150W 447 nt2.92□□□□□ -1.94
RPL40BP0CH09 TUM1YOR251C 915 nt2.92□□□□□ -1.94
RPL40BP0CH09 NUP60YAR002W 1620 nt2.92□□□□□ -1.94
RPL40BP0CH09 SGS1YMR190C 4344 nt2.92□□□□□ -1.94
RPL40BP0CH09 YDL176WYDL176W 2127 nt2.92□□□□□ -1.94
RPL40BP0CH09 RGC1YPR115W 3252 nt2.92□□□□□ -1.94
RPL40BP0CH09 GCD1YOR260W 1737 nt2.91□□□□□ -1.94
RPL40BP0CH09 VFA1YER128W 612 nt2.91□□□□□ -1.94
RPL40BP0CH09 IRC18YJL037W 675 nt2.91□□□□□ -1.94
RPL40BP0CH09 REE1YJL217W 597 nt2.91□□□□□ -1.94
RPL40BP0CH09 PIR1YKL164C 1026 nt2.91□□□□□ -1.94
RPL40BP0CH09 DCS1YLR270W 1053 nt2.91□□□□□ -1.94
RPL40BP0CH09 TRI1YMR233W 681 nt2.91□□□□□ -1.94
RPL40BP0CH09 SUI3YPL237W 858 nt2.91□□□□□ -1.94
RPL40BP0CH09 snR3snR3 194 nt2.91□□□□□ -1.94
RPL40BP0CH09 YMR018WYMR018W 1545 nt2.91□□□□□ -1.94
RPL40BP0CH09 RPA135YPR010C 3612 nt2.91□□□□□ -1.94
RPL40BP0CH09 REB1YBR049C 2433 nt2.91□□□□□ -1.94
RPL40BP0CH09 POL12YBL035C 2118 nt2.9□□□□□ -1.94
RPL40BP0CH09 RNA14YMR061W 2034 nt2.9□□□□□ -1.94
RPL40BP0CH09 URK1YNR012W 1506 nt2.9□□□□□ -1.95
RPL40BP0CH09 ENA2YDR039C 3276 nt2.9□□□□□ -1.95
RPL40BP0CH09 ENA1YDR040C 3276 nt2.9□□□□□ -1.95
RPL40BP0CH09 HMLALPHA1YCL066W 528 nt2.9□□□□□ -1.95
RPL40BP0CH09 MATALPHA1YCR040W 528 nt2.9□□□□□ -1.95
RPL40BP0CH09 QRI7YDL104C 1224 nt2.9□□□□□ -1.95
RPL40BP0CH09 MPS2YGL075C 1164 nt2.9□□□□□ -1.95
RPL40BP0CH09 PDX1YGR193C 1233 nt2.9□□□□□ -1.95
RPL40BP0CH09 YLR255CYLR255C 354 nt2.9□□□□□ -1.95
RPL40BP0CH09 CMD1YBR109C 444 nt2.9□□□□□ -1.95
RPL40BP0CH09 MDM38YOL027C 1722 nt2.9□□□□□ -1.95
RPL40BP0CH09 MYO5YMR109W 3660 nt2.9□□□□□ -1.95
RPL40BP0CH09 PSY2YNL201C 2577 nt2.9□□□□□ -1.95
RPL40BP0CH09 YTA7YGR270W 4140 nt2.9□□□□□ -1.95
RPL40BP0CH09 PMS1YNL082W 2622 nt2.89□□□□□ -1.95
RPL40BP0CH09 PHO13YDL236W 939 nt2.89□□□□□ -1.95
RPL40BP0CH09 YER039C-AYER039C-A 219 nt2.89□□□□□ -1.95
RPL40BP0CH09 YFR032C-BYFR032C-B 264 nt2.89□□□□□ -1.95
RPL40BP0CH09 YGL132WYGL132W 336 nt2.89□□□□□ -1.95
RPL40BP0CH09 YGR126WYGR126W 693 nt2.89□□□□□ -1.95
RPL40BP0CH09 PET54YGR222W 882 nt2.89□□□□□ -1.95
RPL40BP0CH09 YNL013CYNL013C 378 nt2.89□□□□□ -1.95
RPL40BP0CH09 YNL320WYNL320W 855 nt2.89□□□□□ -1.95
RPL40BP0CH09 ARO4YBR249C 1113 nt2.89□□□□□ -1.95
RPL40BP0CH09 KTR6YPL053C 1341 nt2.89□□□□□ -1.95
RPL40BP0CH09 MPC54YOR177C 1395 nt2.88□□□□□ -1.95
RPL40BP0CH09 NUP85YJR042W 2235 nt2.88□□□□□ -1.95
RPL40BP0CH09 UBP5YER144C 2418 nt2.88□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms