Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 AP004607.4-201ENST00000530158 1459 ntBASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB40ALP0C0E4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 AC006015.1-201ENST00000429970 570 ntBASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 KRT18P61-201ENST00000585825 1298 ntBASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 DUSP8P3-201ENST00000399571 1760 ntBASIC20.46■□□□□ 0.87
RAB40ALP0C0E4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40ALP0C0E4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 KRT19P1-201ENST00000405746 1186 ntBASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 AC016769.1-201ENST00000409132 1010 ntBASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 AC137761.2-201ENST00000561729 223 ntBASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 AC145350.3-201ENST00000569033 163 ntBASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 AC092068.2-201ENST00000590491 1708 ntBASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40ALP0C0E4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 ANOS2P-203ENST00000472227 1816 ntBASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 AC004854.2-201ENST00000608450 1441 ntBASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40ALP0C0E4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40ALP0C0E4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB40ALP0C0E4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms