Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CD48P09326 UNC93B3-201ENST00000308076 687 ntBASIC22.54■■□□□ 1.2
CD48P09326 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.54■■□□□ 1.2
CD48P09326 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD48P09326 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CD48P09326 SLC47A1P1-202ENST00000449666 945 ntBASIC22.54■■□□□ 1.2
CD48P09326 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD48P09326 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CD48P09326 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.54■■□□□ 1.2
CD48P09326 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.54■■□□□ 1.2
CD48P09326 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD48P09326 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD48P09326 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD48P09326 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD48P09326 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CD48P09326 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.53■■□□□ 1.2
CD48P09326 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
CD48P09326 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CD48P09326 FBXW4P1-201ENST00000426721 2239 ntBASIC22.53■■□□□ 1.2
CD48P09326 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CD48P09326 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.52■■□□□ 1.2
CD48P09326 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.52■■□□□ 1.2
CD48P09326 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CD48P09326 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CD48P09326 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CD48P09326 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.51■■□□□ 1.19
CD48P09326 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD48P09326 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.51■■□□□ 1.19
CD48P09326 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.51■■□□□ 1.19
CD48P09326 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.51■■□□□ 1.19
CD48P09326 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CD48P09326 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CD48P09326 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.51■■□□□ 1.19
CD48P09326 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CD48P09326 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CD48P09326 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CD48P09326 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.5■■□□□ 1.19
CD48P09326 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.5■■□□□ 1.19
CD48P09326 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CD48P09326 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 AC079089.2-201ENST00000531211 1277 ntBASIC22.5■■□□□ 1.19
CD48P09326 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.5■■□□□ 1.19
CD48P09326 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CD48P09326 AC008406.3-201ENST00000620001 1374 ntBASIC22.5■■□□□ 1.19
CD48P09326 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.49■■□□□ 1.19
CD48P09326 MIR4767-201ENST00000582827 78 ntBASIC22.49■■□□□ 1.19
CD48P09326 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.49■■□□□ 1.19
CD48P09326 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CD48P09326 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CD48P09326 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.48■■□□□ 1.19
CD48P09326 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CD48P09326 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.48■■□□□ 1.19
CD48P09326 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.48■■□□□ 1.19
CD48P09326 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.48■■□□□ 1.19
CD48P09326 AC024257.2-201ENST00000549699 147 ntBASIC22.48■■□□□ 1.19
CD48P09326 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.48■■□□□ 1.19
CD48P09326 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CD48P09326 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.48■■□□□ 1.19
CD48P09326 AC010542.4-201ENST00000563151 1910 ntBASIC22.47■■□□□ 1.19
CD48P09326 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 AL136162.1-201ENST00000607711 1078 ntBASIC22.47■■□□□ 1.19
CD48P09326 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.47■■□□□ 1.19
CD48P09326 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CD48P09326 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.47■■□□□ 1.19
CD48P09326 FAM99A-202ENST00000538190 1989 ntBASIC22.47■■□□□ 1.19
CD48P09326 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD48P09326 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.46■■□□□ 1.19
CD48P09326 AC007375.3-201ENST00000600936 2314 ntBASIC22.46■■□□□ 1.19
CD48P09326 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD48P09326 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD48P09326 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CD48P09326 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.46■■□□□ 1.19
CD48P09326 AC068587.7-201ENST00000641602 218 ntBASIC22.46■■□□□ 1.19
CD48P09326 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.46■■□□□ 1.19
CD48P09326 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
CD48P09326 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD48P09326 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
CD48P09326 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CD48P09326 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CD48P09326 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms