Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MRPL3P09001 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.41■□□□□ 0.7
MRPL3P09001 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 AC005229.4-201ENST00000610085 2198 ntBASIC19.41■□□□□ 0.7
MRPL3P09001 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.41■□□□□ 0.7
MRPL3P09001 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL3P09001 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
MRPL3P09001 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.4■□□□□ 0.7
MRPL3P09001 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.4■□□□□ 0.7
MRPL3P09001 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
MRPL3P09001 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.4■□□□□ 0.7
MRPL3P09001 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MRPL3P09001 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.4■□□□□ 0.7
MRPL3P09001 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MRPL3P09001 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MRPL3P09001 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.4■□□□□ 0.7
MRPL3P09001 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MRPL3P09001 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL3P09001 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.39■□□□□ 0.7
MRPL3P09001 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MRPL3P09001 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MRPL3P09001 KRT125P-201ENST00000546827 989 ntBASIC19.39■□□□□ 0.69
MRPL3P09001 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MRPL3P09001 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPL3P09001 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPL3P09001 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
MRPL3P09001 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPL3P09001 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
MRPL3P09001 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MRPL3P09001 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.38■□□□□ 0.69
MRPL3P09001 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
MRPL3P09001 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MRPL3P09001 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.38■□□□□ 0.69
MRPL3P09001 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MRPL3P09001 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL3P09001 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.37■□□□□ 0.69
MRPL3P09001 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.37■□□□□ 0.69
MRPL3P09001 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.37■□□□□ 0.69
MRPL3P09001 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 CA15P2-201ENST00000611168 834 ntBASIC19.37■□□□□ 0.69
MRPL3P09001 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL3P09001 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.37■□□□□ 0.69
MRPL3P09001 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MRPL3P09001 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.37■□□□□ 0.69
MRPL3P09001 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.36■□□□□ 0.69
MRPL3P09001 C17orf82-201ENST00000623772 1530 ntBASIC19.36■□□□□ 0.69
MRPL3P09001 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.36■□□□□ 0.69
MRPL3P09001 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.36■□□□□ 0.69
MRPL3P09001 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.36■□□□□ 0.69
MRPL3P09001 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL3P09001 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
MRPL3P09001 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms