Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DQB2P05538 RASA4CP-201ENST00000424092 1398 ntBASIC22.05■■□□□ 1.12
HLA-DQB2P05538 MIR638-201ENST00000385237 100 ntBASIC22.05■■□□□ 1.12
HLA-DQB2P05538 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.05■■□□□ 1.12
HLA-DQB2P05538 IGHV3-19-201ENST00000521488 291 ntBASIC22.05■■□□□ 1.12
HLA-DQB2P05538 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
HLA-DQB2P05538 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 AC091305.1-201ENST00000479476 895 ntBASIC22.04■■□□□ 1.12
HLA-DQB2P05538 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
HLA-DQB2P05538 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 AC005837.3-201ENST00000612163 286 ntBASIC22.03■■□□□ 1.12
HLA-DQB2P05538 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.03■■□□□ 1.12
HLA-DQB2P05538 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 TSPY26P-201ENST00000476365 1326 ntBASIC22.02■■□□□ 1.12
HLA-DQB2P05538 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQB2P05538 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
HLA-DQB2P05538 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
HLA-DQB2P05538 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
HLA-DQB2P05538 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
HLA-DQB2P05538 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 OR7E47P-201ENST00000546390 1422 ntBASIC22.01■■□□□ 1.11
HLA-DQB2P05538 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 AC142381.2-201ENST00000566120 298 ntBASIC22.01■■□□□ 1.11
HLA-DQB2P05538 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DQB2P05538 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
HLA-DQB2P05538 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
HLA-DQB2P05538 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22■■□□□ 1.11
HLA-DQB2P05538 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22■■□□□ 1.11
HLA-DQB2P05538 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DQB2P05538 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22■■□□□ 1.11
HLA-DQB2P05538 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22■■□□□ 1.11
HLA-DQB2P05538 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DQB2P05538 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
HLA-DQB2P05538 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DQB2P05538 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms