Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGN2P05204 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGN2P05204 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HMGN2P05204 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HMGN2P05204 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN2P05204 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN2P05204 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN2P05204 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN2P05204 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGN2P05204 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HMGN2P05204 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN2P05204 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGN2P05204 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGN2P05204 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMGN2P05204 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.27■□□□□ 0.83
HMGN2P05204 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMGN2P05204 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMGN2P05204 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HMGN2P05204 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HMGN2P05204 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGN2P05204 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 AC079089.2-201ENST00000531211 1277 ntBASIC20.26■□□□□ 0.83
HMGN2P05204 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGN2P05204 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HMGN2P05204 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGN2P05204 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HMGN2P05204 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGN2P05204 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN2P05204 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGN2P05204 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HMGN2P05204 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN2P05204 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN2P05204 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN2P05204 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.25■□□□□ 0.83
HMGN2P05204 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGN2P05204 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
HMGN2P05204 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGN2P05204 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN2P05204 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGN2P05204 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN2P05204 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN2P05204 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN2P05204 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN2P05204 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HMGN2P05204 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.24■□□□□ 0.83
HMGN2P05204 FBXW4P1-201ENST00000426721 2239 ntBASIC20.24■□□□□ 0.83
HMGN2P05204 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.24■□□□□ 0.83
HMGN2P05204 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN2P05204 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.24■□□□□ 0.83
HMGN2P05204 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HMGN2P05204 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN2P05204 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HMGN2P05204 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGN2P05204 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HMGN2P05204 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HMGN2P05204 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HMGN2P05204 AC087239.1-201ENST00000622671 572 ntBASIC20.23■□□□□ 0.83
HMGN2P05204 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HMGN2P05204 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN2P05204 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN2P05204 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN2P05204 CLDN5-201ENST00000403084 2357 ntBASIC20.22■□□□□ 0.83
HMGN2P05204 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN2P05204 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN2P05204 SLC47A1P1-202ENST00000449666 945 ntBASIC20.22■□□□□ 0.83
HMGN2P05204 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN2P05204 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN2P05204 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGN2P05204 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HMGN2P05204 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 UNC93B3-201ENST00000308076 687 ntBASIC20.21■□□□□ 0.83
HMGN2P05204 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.21■□□□□ 0.83
HMGN2P05204 AC010141.3-201ENST00000456659 717 ntBASIC20.21■□□□□ 0.83
HMGN2P05204 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.21■□□□□ 0.83
HMGN2P05204 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN2P05204 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms