Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 EP400NL-214ENST00000641289 2402 ntBASIC23.38■■□□□ 1.33
HLA-DRAP01903 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HLA-DRAP01903 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.37■■□□□ 1.33
HLA-DRAP01903 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HLA-DRAP01903 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HLA-DRAP01903 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
HLA-DRAP01903 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HLA-DRAP01903 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.37■■□□□ 1.33
HLA-DRAP01903 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
HLA-DRAP01903 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.37■■□□□ 1.33
HLA-DRAP01903 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
HLA-DRAP01903 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HLA-DRAP01903 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
HLA-DRAP01903 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HLA-DRAP01903 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
HLA-DRAP01903 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
HLA-DRAP01903 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HLA-DRAP01903 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HLA-DRAP01903 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HLA-DRAP01903 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.36■■□□□ 1.33
HLA-DRAP01903 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HLA-DRAP01903 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.35■■□□□ 1.33
HLA-DRAP01903 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
HLA-DRAP01903 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.35■■□□□ 1.33
HLA-DRAP01903 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.35■■□□□ 1.33
HLA-DRAP01903 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
HLA-DRAP01903 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HLA-DRAP01903 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.35■■□□□ 1.33
HLA-DRAP01903 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HLA-DRAP01903 OR7E47P-201ENST00000546390 1422 ntBASIC23.34■■□□□ 1.33
HLA-DRAP01903 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
HLA-DRAP01903 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HLA-DRAP01903 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.34■■□□□ 1.33
HLA-DRAP01903 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HLA-DRAP01903 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HLA-DRAP01903 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.34■■□□□ 1.33
HLA-DRAP01903 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
HLA-DRAP01903 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HLA-DRAP01903 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.34■■□□□ 1.33
HLA-DRAP01903 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.34■■□□□ 1.33
HLA-DRAP01903 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HLA-DRAP01903 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
HLA-DRAP01903 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HLA-DRAP01903 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.33■■□□□ 1.33
HLA-DRAP01903 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HLA-DRAP01903 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HLA-DRAP01903 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HLA-DRAP01903 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HLA-DRAP01903 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.33■■□□□ 1.33
HLA-DRAP01903 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.33■■□□□ 1.33
HLA-DRAP01903 AC105265.2-201ENST00000467189 838 ntBASIC23.33■■□□□ 1.33
HLA-DRAP01903 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HLA-DRAP01903 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HLA-DRAP01903 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HLA-DRAP01903 AC092053.2-201ENST00000640557 1818 ntBASIC23.33■■□□□ 1.32
HLA-DRAP01903 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
HLA-DRAP01903 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.33■■□□□ 1.32
HLA-DRAP01903 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.33■■□□□ 1.32
HLA-DRAP01903 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.32■■□□□ 1.32
HLA-DRAP01903 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.32■■□□□ 1.32
HLA-DRAP01903 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.32■■□□□ 1.32
HLA-DRAP01903 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HLA-DRAP01903 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HLA-DRAP01903 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
HLA-DRAP01903 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HLA-DRAP01903 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.31■■□□□ 1.32
HLA-DRAP01903 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HLA-DRAP01903 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.31■■□□□ 1.32
HLA-DRAP01903 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
HLA-DRAP01903 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HLA-DRAP01903 SMUG1P1-201ENST00000590640 811 ntBASIC23.31■■□□□ 1.32
HLA-DRAP01903 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HLA-DRAP01903 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.31■■□□□ 1.32
HLA-DRAP01903 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HLA-DRAP01903 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.31■■□□□ 1.32
HLA-DRAP01903 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms