Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC009237.3-201ENST00000393279 1427 ntBASIC17.88■□□□□ 0.45
TGFAP01135 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.88■□□□□ 0.45
TGFAP01135 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.87■□□□□ 0.45
TGFAP01135 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.87■□□□□ 0.45
TGFAP01135 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.87■□□□□ 0.45
TGFAP01135 AC104187.1-201ENST00000607510 612 ntBASIC17.87■□□□□ 0.45
TGFAP01135 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.87■□□□□ 0.45
TGFAP01135 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TGFAP01135 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TGFAP01135 AC005224.4-201ENST00000583262 1652 ntBASIC17.87■□□□□ 0.45
TGFAP01135 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.86■□□□□ 0.45
TGFAP01135 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 KRT87P-202ENST00000534226 1464 ntBASIC17.86■□□□□ 0.45
TGFAP01135 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TGFAP01135 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.86■□□□□ 0.45
TGFAP01135 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TGFAP01135 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TGFAP01135 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TGFAP01135 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TGFAP01135 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.84■□□□□ 0.45
TGFAP01135 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TGFAP01135 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.84■□□□□ 0.45
TGFAP01135 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.84■□□□□ 0.45
TGFAP01135 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.84■□□□□ 0.45
TGFAP01135 DUSP8P3-201ENST00000399571 1760 ntBASIC17.84■□□□□ 0.45
TGFAP01135 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TGFAP01135 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TGFAP01135 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TGFAP01135 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
TGFAP01135 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TGFAP01135 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TGFAP01135 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TGFAP01135 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
TGFAP01135 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TGFAP01135 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TGFAP01135 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TGFAP01135 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.83■□□□□ 0.44
TGFAP01135 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.83■□□□□ 0.44
TGFAP01135 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.83■□□□□ 0.44
TGFAP01135 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TGFAP01135 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.83■□□□□ 0.44
TGFAP01135 MFSD11-216ENST00000590393 1141 ntBASIC17.83■□□□□ 0.44
TGFAP01135 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.83■□□□□ 0.44
TGFAP01135 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TGFAP01135 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TGFAP01135 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
TGFAP01135 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TGFAP01135 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TGFAP01135 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TGFAP01135 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TGFAP01135 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TGFAP01135 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TGFAP01135 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TGFAP01135 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TGFAP01135 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TGFAP01135 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.82■□□□□ 0.44
TGFAP01135 AL121832.2-201ENST00000610979 668 ntBASIC17.82■□□□□ 0.44
TGFAP01135 AC231657.2-201ENST00000624556 255 ntBASIC17.82■□□□□ 0.44
TGFAP01135 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TGFAP01135 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.81■□□□□ 0.44
TGFAP01135 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TGFAP01135 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TGFAP01135 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.81■□□□□ 0.44
TGFAP01135 ABHD17AP1-201ENST00000358206 933 ntBASIC17.81■□□□□ 0.44
TGFAP01135 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.81■□□□□ 0.44
TGFAP01135 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms