Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TIMP1P01033 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TIMP1P01033 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.77■■□□□ 1.4
TIMP1P01033 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.77■■□□□ 1.4
TIMP1P01033 KRT18P20-201ENST00000548986 1279 ntBASIC23.77■■□□□ 1.4
TIMP1P01033 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TIMP1P01033 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.77■■□□□ 1.4
TIMP1P01033 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TIMP1P01033 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TIMP1P01033 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.76■■□□□ 1.39
TIMP1P01033 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.76■■□□□ 1.39
TIMP1P01033 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TIMP1P01033 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TIMP1P01033 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.75■■□□□ 1.39
TIMP1P01033 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
TIMP1P01033 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.75■■□□□ 1.39
TIMP1P01033 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TIMP1P01033 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TIMP1P01033 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.75■■□□□ 1.39
TIMP1P01033 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
TIMP1P01033 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
TIMP1P01033 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.74■■□□□ 1.39
TIMP1P01033 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TIMP1P01033 MIPEPP3-201ENST00000412105 444 ntBASIC23.74■■□□□ 1.39
TIMP1P01033 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.74■■□□□ 1.39
TIMP1P01033 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.74■■□□□ 1.39
TIMP1P01033 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.74■■□□□ 1.39
TIMP1P01033 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.74■■□□□ 1.39
TIMP1P01033 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.73■■□□□ 1.39
TIMP1P01033 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TIMP1P01033 DUSP8P3-201ENST00000399571 1760 ntBASIC23.73■■□□□ 1.39
TIMP1P01033 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TIMP1P01033 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TIMP1P01033 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TIMP1P01033 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TIMP1P01033 AC010141.2-201ENST00000452426 721 ntBASIC23.73■■□□□ 1.39
TIMP1P01033 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.73■■□□□ 1.39
TIMP1P01033 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.73■■□□□ 1.39
TIMP1P01033 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.73■■□□□ 1.39
TIMP1P01033 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TIMP1P01033 AC055733.4-201ENST00000638462 1354 ntBASIC23.73■■□□□ 1.39
TIMP1P01033 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.73■■□□□ 1.39
TIMP1P01033 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TIMP1P01033 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TIMP1P01033 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TIMP1P01033 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TIMP1P01033 AC138907.5-202ENST00000569484 235 ntBASIC23.72■■□□□ 1.39
TIMP1P01033 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.72■■□□□ 1.39
TIMP1P01033 AC013268.1-206ENST00000638368 961 ntBASIC23.72■■□□□ 1.39
TIMP1P01033 AC112229.1-201ENST00000639295 961 ntBASIC23.72■■□□□ 1.39
TIMP1P01033 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.72■■□□□ 1.39
TIMP1P01033 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TIMP1P01033 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TIMP1P01033 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.72■■□□□ 1.39
TIMP1P01033 AC138932.3-201ENST00000567634 1902 ntBASIC23.72■■□□□ 1.39
TIMP1P01033 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TIMP1P01033 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TIMP1P01033 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TIMP1P01033 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TIMP1P01033 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TIMP1P01033 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TIMP1P01033 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.71■■□□□ 1.39
TIMP1P01033 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TIMP1P01033 RPS2P52-201ENST00000469610 820 ntBASIC23.71■■□□□ 1.39
TIMP1P01033 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TIMP1P01033 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TIMP1P01033 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TIMP1P01033 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.7■■□□□ 1.38
TIMP1P01033 MKRN4P-201ENST00000444706 1521 ntBASIC23.7■■□□□ 1.38
TIMP1P01033 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TIMP1P01033 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TIMP1P01033 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TIMP1P01033 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.7■■□□□ 1.38
TIMP1P01033 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.7■■□□□ 1.38
TIMP1P01033 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.7■■□□□ 1.38
TIMP1P01033 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.7■■□□□ 1.38
TIMP1P01033 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.7■■□□□ 1.38
TIMP1P01033 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
TIMP1P01033 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TIMP1P01033 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.7■■□□□ 1.38
TIMP1P01033 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TIMP1P01033 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TIMP1P01033 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TIMP1P01033 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.69■■□□□ 1.38
TIMP1P01033 AC068338.2-201ENST00000563278 1430 ntBASIC23.69■■□□□ 1.38
TIMP1P01033 TERF1P5-201ENST00000477545 1207 ntBASIC23.69■■□□□ 1.38
TIMP1P01033 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TIMP1P01033 SLC7A5P1-201ENST00000568957 537 ntBASIC23.69■■□□□ 1.38
TIMP1P01033 AP006294.2-201ENST00000641667 209 ntBASIC23.69■■□□□ 1.38
TIMP1P01033 AC142381.3-201ENST00000568208 1670 ntBASIC23.69■■□□□ 1.38
TIMP1P01033 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms