Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
POLR1AO95602 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.82■■■□□ 2.68
POLR1AO95602 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
POLR1AO95602 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
POLR1AO95602 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
POLR1AO95602 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
POLR1AO95602 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
POLR1AO95602 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.81■■■□□ 2.68
POLR1AO95602 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
POLR1AO95602 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
POLR1AO95602 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
POLR1AO95602 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.81■■■□□ 2.68
POLR1AO95602 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
POLR1AO95602 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
POLR1AO95602 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.81■■■□□ 2.68
POLR1AO95602 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
POLR1AO95602 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.81■■■□□ 2.68
POLR1AO95602 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
POLR1AO95602 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
POLR1AO95602 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.8■■■□□ 2.68
POLR1AO95602 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
POLR1AO95602 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
POLR1AO95602 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
POLR1AO95602 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC31.8■■■□□ 2.68
POLR1AO95602 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
POLR1AO95602 FP325331.1-202ENST00000623531 1380 ntBASIC31.79■■■□□ 2.68
POLR1AO95602 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
POLR1AO95602 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
POLR1AO95602 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.79■■■□□ 2.68
POLR1AO95602 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
POLR1AO95602 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
POLR1AO95602 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
POLR1AO95602 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
POLR1AO95602 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.78■■■□□ 2.68
POLR1AO95602 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
POLR1AO95602 AC079140.4-201ENST00000507448 529 ntBASIC31.78■■■□□ 2.68
POLR1AO95602 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC31.77■■■□□ 2.68
POLR1AO95602 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
POLR1AO95602 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
POLR1AO95602 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
POLR1AO95602 AC092068.2-201ENST00000590491 1708 ntBASIC31.77■■■□□ 2.68
POLR1AO95602 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
POLR1AO95602 CNN2P6-201ENST00000439038 900 ntBASIC31.77■■■□□ 2.68
POLR1AO95602 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.77■■■□□ 2.68
POLR1AO95602 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
POLR1AO95602 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
POLR1AO95602 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
POLR1AO95602 AC007322.1-201ENST00000426983 750 ntBASIC31.76■■■□□ 2.67
POLR1AO95602 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
POLR1AO95602 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.76■■■□□ 2.67
POLR1AO95602 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.76■■■□□ 2.67
POLR1AO95602 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR1AO95602 PRORSD1P-201ENST00000295112 541 ntBASIC31.75■■■□□ 2.67
POLR1AO95602 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.75■■■□□ 2.67
POLR1AO95602 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
POLR1AO95602 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
POLR1AO95602 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.75■■■□□ 2.67
POLR1AO95602 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC31.75■■■□□ 2.67
POLR1AO95602 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR1AO95602 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR1AO95602 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
POLR1AO95602 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.75■■■□□ 2.67
POLR1AO95602 KRT87P-202ENST00000534226 1464 ntBASIC31.75■■■□□ 2.67
POLR1AO95602 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.75■■■□□ 2.67
POLR1AO95602 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC31.75■■■□□ 2.67
POLR1AO95602 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
POLR1AO95602 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.75■■■□□ 2.67
POLR1AO95602 SLC7A5P1-201ENST00000568957 537 ntBASIC31.75■■■□□ 2.67
POLR1AO95602 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.75■■■□□ 2.67
POLR1AO95602 AC104187.1-201ENST00000607510 612 ntBASIC31.75■■■□□ 2.67
POLR1AO95602 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
POLR1AO95602 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.74■■■□□ 2.67
POLR1AO95602 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
POLR1AO95602 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.74■■■□□ 2.67
POLR1AO95602 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.74■■■□□ 2.67
POLR1AO95602 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.74■■■□□ 2.67
POLR1AO95602 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.74■■■□□ 2.67
POLR1AO95602 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
POLR1AO95602 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
POLR1AO95602 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
POLR1AO95602 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC31.73■■■□□ 2.67
POLR1AO95602 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.73■■■□□ 2.67
POLR1AO95602 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.73■■■□□ 2.67
POLR1AO95602 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
POLR1AO95602 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
POLR1AO95602 H19-210ENST00000439725 1929 ntTSL 2 BASIC31.73■■■□□ 2.67
POLR1AO95602 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC31.73■■■□□ 2.67
POLR1AO95602 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
POLR1AO95602 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
POLR1AO95602 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
POLR1AO95602 SMUG1P1-201ENST00000590640 811 ntBASIC31.72■■■□□ 2.67
POLR1AO95602 MYCNOS-205ENST00000641950 531 ntBASIC31.72■■■□□ 2.67
POLR1AO95602 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
POLR1AO95602 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
POLR1AO95602 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
POLR1AO95602 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.72■■■□□ 2.67
POLR1AO95602 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
POLR1AO95602 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC31.72■■■□□ 2.67
POLR1AO95602 AF201337.1-201ENST00000520239 748 ntBASIC31.72■■■□□ 2.67
POLR1AO95602 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms