Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.65■□□□□ 0.42
SCAF4O95104 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.65■□□□□ 0.42
SCAF4O95104 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCAF4O95104 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCAF4O95104 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCAF4O95104 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCAF4O95104 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SCAF4O95104 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCAF4O95104 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCAF4O95104 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.65■□□□□ 0.42
SCAF4O95104 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.64■□□□□ 0.41
SCAF4O95104 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCAF4O95104 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.64■□□□□ 0.41
SCAF4O95104 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.64■□□□□ 0.41
SCAF4O95104 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.64■□□□□ 0.41
SCAF4O95104 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.64■□□□□ 0.41
SCAF4O95104 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCAF4O95104 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCAF4O95104 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCAF4O95104 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.63■□□□□ 0.41
SCAF4O95104 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.63■□□□□ 0.41
SCAF4O95104 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCAF4O95104 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCAF4O95104 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCAF4O95104 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SCAF4O95104 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCAF4O95104 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCAF4O95104 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCAF4O95104 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCAF4O95104 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.63■□□□□ 0.41
SCAF4O95104 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.62■□□□□ 0.41
SCAF4O95104 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.62■□□□□ 0.41
SCAF4O95104 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.62■□□□□ 0.41
SCAF4O95104 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
SCAF4O95104 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.62■□□□□ 0.41
SCAF4O95104 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.62■□□□□ 0.41
SCAF4O95104 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.62■□□□□ 0.41
SCAF4O95104 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.62■□□□□ 0.41
SCAF4O95104 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCAF4O95104 AC144652.1-201ENST00000609974 1624 ntBASIC17.61■□□□□ 0.41
SCAF4O95104 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.61■□□□□ 0.41
SCAF4O95104 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCAF4O95104 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 AC004448.1-201ENST00000458332 883 ntBASIC17.61■□□□□ 0.41
SCAF4O95104 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.61■□□□□ 0.41
SCAF4O95104 AC009299.2-201ENST00000482477 511 ntBASIC17.61■□□□□ 0.41
SCAF4O95104 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.61■□□□□ 0.41
SCAF4O95104 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.61■□□□□ 0.41
SCAF4O95104 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.61■□□□□ 0.41
SCAF4O95104 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCAF4O95104 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.61■□□□□ 0.41
SCAF4O95104 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.61■□□□□ 0.41
SCAF4O95104 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCAF4O95104 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SCAF4O95104 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.6■□□□□ 0.41
SCAF4O95104 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
SCAF4O95104 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SCAF4O95104 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.6■□□□□ 0.41
SCAF4O95104 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SCAF4O95104 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SCAF4O95104 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.6■□□□□ 0.41
SCAF4O95104 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SCAF4O95104 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SCAF4O95104 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SCAF4O95104 AC087742.1-201ENST00000575880 1738 ntBASIC17.6■□□□□ 0.41
SCAF4O95104 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCAF4O95104 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAF4O95104 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCAF4O95104 AC080038.3-201ENST00000623346 1952 ntBASIC17.59■□□□□ 0.41
SCAF4O95104 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.59■□□□□ 0.41
SCAF4O95104 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms