Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 AC233723.2-201ENST00000623798 2106 ntBASIC20.84■□□□□ 0.93
SNRNP200O75643 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SNRNP200O75643 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 AC123595.1-201ENST00000440769 1046 ntBASIC20.84■□□□□ 0.93
SNRNP200O75643 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 MIR6821-201ENST00000617625 74 ntBASIC20.84■□□□□ 0.93
SNRNP200O75643 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.84■□□□□ 0.93
SNRNP200O75643 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.84■□□□□ 0.93
SNRNP200O75643 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRNP200O75643 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.84■□□□□ 0.93
SNRNP200O75643 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNRNP200O75643 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.83■□□□□ 0.93
SNRNP200O75643 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNRNP200O75643 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SNRNP200O75643 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNRNP200O75643 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNRNP200O75643 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SNRNP200O75643 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.83■□□□□ 0.92
SNRNP200O75643 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.83■□□□□ 0.92
SNRNP200O75643 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SNRNP200O75643 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.82■□□□□ 0.92
SNRNP200O75643 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.82■□□□□ 0.92
SNRNP200O75643 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.82■□□□□ 0.92
SNRNP200O75643 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP200O75643 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP200O75643 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP200O75643 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.82■□□□□ 0.92
SNRNP200O75643 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.82■□□□□ 0.92
SNRNP200O75643 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP200O75643 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP200O75643 CCDC92B-201ENST00000575506 885 ntBASIC20.82■□□□□ 0.92
SNRNP200O75643 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP200O75643 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.82■□□□□ 0.92
SNRNP200O75643 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNRNP200O75643 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.82■□□□□ 0.92
SNRNP200O75643 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SNRNP200O75643 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNRNP200O75643 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.81■□□□□ 0.92
SNRNP200O75643 TERF1P2-201ENST00000583350 1212 ntBASIC20.81■□□□□ 0.92
SNRNP200O75643 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNRNP200O75643 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNRNP200O75643 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SNRNP200O75643 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.81■□□□□ 0.92
SNRNP200O75643 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.81■□□□□ 0.92
SNRNP200O75643 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNRNP200O75643 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNRNP200O75643 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNRNP200O75643 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SNRNP200O75643 BX005040.4-201ENST00000637145 1518 ntBASIC20.81■□□□□ 0.92
SNRNP200O75643 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SNRNP200O75643 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.8■□□□□ 0.92
SNRNP200O75643 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.8■□□□□ 0.92
SNRNP200O75643 AC105233.4-201ENST00000642045 216 ntBASIC20.8■□□□□ 0.92
SNRNP200O75643 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 OR7E47P-201ENST00000546390 1422 ntBASIC20.8■□□□□ 0.92
SNRNP200O75643 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRNP200O75643 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.8■□□□□ 0.92
SNRNP200O75643 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SNRNP200O75643 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRNP200O75643 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.79■□□□□ 0.92
SNRNP200O75643 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRNP200O75643 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SNRNP200O75643 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRNP200O75643 AC005224.4-201ENST00000583262 1652 ntBASIC20.79■□□□□ 0.92
SNRNP200O75643 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SNRNP200O75643 AC079089.2-201ENST00000531211 1277 ntBASIC20.78■□□□□ 0.92
SNRNP200O75643 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP200O75643 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.78■□□□□ 0.92
SNRNP200O75643 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRNP200O75643 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRNP200O75643 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP200O75643 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SNRNP200O75643 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.78■□□□□ 0.92
SNRNP200O75643 YBX1P1-201ENST00000445822 960 ntBASIC20.78■□□□□ 0.92
SNRNP200O75643 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP200O75643 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.78■□□□□ 0.92
SNRNP200O75643 AL162430.1-201ENST00000480705 870 ntBASIC20.78■□□□□ 0.92
SNRNP200O75643 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP200O75643 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP200O75643 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNRNP200O75643 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms