Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 THA1P-201ENST00000590384 1145 ntBASIC17.63■□□□□ 0.41
SSSCA1O60232 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.63■□□□□ 0.41
SSSCA1O60232 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.63■□□□□ 0.41
SSSCA1O60232 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
SSSCA1O60232 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.63■□□□□ 0.41
SSSCA1O60232 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.63■□□□□ 0.41
SSSCA1O60232 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SSSCA1O60232 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SSSCA1O60232 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSSCA1O60232 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SSSCA1O60232 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SSSCA1O60232 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 Z98882.1-201ENST00000622160 2253 ntBASIC17.62■□□□□ 0.41
SSSCA1O60232 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.62■□□□□ 0.41
SSSCA1O60232 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
SSSCA1O60232 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SSSCA1O60232 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SSSCA1O60232 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SSSCA1O60232 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 AF106564.1-201ENST00000607058 2553 ntBASIC17.62■□□□□ 0.41
SSSCA1O60232 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.62■□□□□ 0.41
SSSCA1O60232 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSSCA1O60232 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SSSCA1O60232 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.61■□□□□ 0.41
SSSCA1O60232 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SSSCA1O60232 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.61■□□□□ 0.41
SSSCA1O60232 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.61■□□□□ 0.41
SSSCA1O60232 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.61■□□□□ 0.41
SSSCA1O60232 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.61■□□□□ 0.41
SSSCA1O60232 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.61■□□□□ 0.41
SSSCA1O60232 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 AL157384.1-201ENST00000445995 2473 ntBASIC17.61■□□□□ 0.41
SSSCA1O60232 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSSCA1O60232 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SSSCA1O60232 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.6■□□□□ 0.41
SSSCA1O60232 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.6■□□□□ 0.41
SSSCA1O60232 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.6■□□□□ 0.41
SSSCA1O60232 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SSSCA1O60232 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SSSCA1O60232 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.6■□□□□ 0.41
SSSCA1O60232 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.6■□□□□ 0.41
SSSCA1O60232 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SSSCA1O60232 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SSSCA1O60232 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SSSCA1O60232 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SSSCA1O60232 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.59■□□□□ 0.41
SSSCA1O60232 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.59■□□□□ 0.41
SSSCA1O60232 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSSCA1O60232 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms