Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF13O43567 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 AL512631.2-201ENST00000604634 923 ntBASIC19.69■□□□□ 0.74
RNF13O43567 AC092171.4-201ENST00000609130 632 ntBASIC19.69■□□□□ 0.74
RNF13O43567 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.69■□□□□ 0.74
RNF13O43567 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF13O43567 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RNF13O43567 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF13O43567 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF13O43567 AC080038.3-201ENST00000623346 1952 ntBASIC19.68■□□□□ 0.74
RNF13O43567 AC133637.1-201ENST00000624115 1537 ntBASIC19.68■□□□□ 0.74
RNF13O43567 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF13O43567 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF13O43567 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF13O43567 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF13O43567 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF13O43567 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RNF13O43567 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF13O43567 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF13O43567 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF13O43567 FBXW4P1-201ENST00000426721 2239 ntBASIC19.68■□□□□ 0.74
RNF13O43567 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF13O43567 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF13O43567 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF13O43567 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF13O43567 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF13O43567 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF13O43567 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF13O43567 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF13O43567 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF13O43567 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF13O43567 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF13O43567 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF13O43567 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF13O43567 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF13O43567 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF13O43567 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF13O43567 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF13O43567 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF13O43567 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF13O43567 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF13O43567 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF13O43567 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF13O43567 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF13O43567 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF13O43567 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF13O43567 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF13O43567 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF13O43567 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF13O43567 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF13O43567 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF13O43567 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.65■□□□□ 0.74
RNF13O43567 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF13O43567 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF13O43567 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RNF13O43567 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF13O43567 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.64■□□□□ 0.74
RNF13O43567 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF13O43567 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF13O43567 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF13O43567 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF13O43567 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.64■□□□□ 0.73
RNF13O43567 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF13O43567 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF13O43567 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF13O43567 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF13O43567 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
RNF13O43567 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms