Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
XRCC2O43543 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
XRCC2O43543 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
XRCC2O43543 C11orf96-202ENST00000528572 1834 ntBASIC18.81■□□□□ 0.6
XRCC2O43543 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.81■□□□□ 0.6
XRCC2O43543 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
XRCC2O43543 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XRCC2O43543 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.81■□□□□ 0.6
XRCC2O43543 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
XRCC2O43543 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.8■□□□□ 0.6
XRCC2O43543 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.8■□□□□ 0.6
XRCC2O43543 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.8■□□□□ 0.6
XRCC2O43543 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XRCC2O43543 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
XRCC2O43543 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.79■□□□□ 0.6
XRCC2O43543 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
XRCC2O43543 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.79■□□□□ 0.6
XRCC2O43543 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 AC079089.2-201ENST00000531211 1277 ntBASIC18.79■□□□□ 0.6
XRCC2O43543 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.79■□□□□ 0.6
XRCC2O43543 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XRCC2O43543 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
XRCC2O43543 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.78■□□□□ 0.6
XRCC2O43543 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
XRCC2O43543 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
XRCC2O43543 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
XRCC2O43543 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
XRCC2O43543 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
XRCC2O43543 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
XRCC2O43543 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.78■□□□□ 0.6
XRCC2O43543 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.78■□□□□ 0.6
XRCC2O43543 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
XRCC2O43543 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.78■□□□□ 0.6
XRCC2O43543 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XRCC2O43543 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XRCC2O43543 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XRCC2O43543 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
XRCC2O43543 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.78■□□□□ 0.6
XRCC2O43543 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.78■□□□□ 0.6
XRCC2O43543 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
XRCC2O43543 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XRCC2O43543 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
XRCC2O43543 AC010141.3-201ENST00000456659 717 ntBASIC18.77■□□□□ 0.6
XRCC2O43543 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.77■□□□□ 0.6
XRCC2O43543 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XRCC2O43543 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.77■□□□□ 0.6
XRCC2O43543 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
XRCC2O43543 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
XRCC2O43543 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
XRCC2O43543 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
XRCC2O43543 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
XRCC2O43543 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
XRCC2O43543 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
XRCC2O43543 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
XRCC2O43543 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
XRCC2O43543 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
XRCC2O43543 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.76■□□□□ 0.59
XRCC2O43543 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
XRCC2O43543 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.76■□□□□ 0.59
XRCC2O43543 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
XRCC2O43543 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms