Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFSF11O14788 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TNFSF11O14788 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
TNFSF11O14788 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.46■□□□□ 0.71
TNFSF11O14788 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.46■□□□□ 0.71
TNFSF11O14788 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TNFSF11O14788 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.46■□□□□ 0.71
TNFSF11O14788 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFSF11O14788 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.46■□□□□ 0.71
TNFSF11O14788 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.46■□□□□ 0.71
TNFSF11O14788 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFSF11O14788 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFSF11O14788 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
TNFSF11O14788 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TNFSF11O14788 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFSF11O14788 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.45■□□□□ 0.7
TNFSF11O14788 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFSF11O14788 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFSF11O14788 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TNFSF11O14788 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFSF11O14788 LINC00526-201ENST00000581067 1875 ntBASIC19.45■□□□□ 0.7
TNFSF11O14788 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TNFSF11O14788 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.45■□□□□ 0.7
TNFSF11O14788 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFSF11O14788 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
TNFSF11O14788 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.44■□□□□ 0.7
TNFSF11O14788 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.44■□□□□ 0.7
TNFSF11O14788 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 AC139530.1-201ENST00000575312 1977 ntBASIC19.44■□□□□ 0.7
TNFSF11O14788 AC133561.1-201ENST00000568600 2415 ntBASIC19.44■□□□□ 0.7
TNFSF11O14788 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNFSF11O14788 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.44■□□□□ 0.7
TNFSF11O14788 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFSF11O14788 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNFSF11O14788 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.44■□□□□ 0.7
TNFSF11O14788 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 AC233723.2-201ENST00000623798 2106 ntBASIC19.43■□□□□ 0.7
TNFSF11O14788 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF11O14788 OR7E47P-201ENST00000546390 1422 ntBASIC19.43■□□□□ 0.7
TNFSF11O14788 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TNFSF11O14788 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 AC127496.7-201ENST00000625110 1798 ntBASIC19.43■□□□□ 0.7
TNFSF11O14788 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF11O14788 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.43■□□□□ 0.7
TNFSF11O14788 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF11O14788 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF11O14788 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF11O14788 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.43■□□□□ 0.7
TNFSF11O14788 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFSF11O14788 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFSF11O14788 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF11O14788 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
TNFSF11O14788 AC080038.3-201ENST00000623346 1952 ntBASIC19.43■□□□□ 0.7
TNFSF11O14788 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TNFSF11O14788 AC027612.3-201ENST00000413684 1047 ntBASIC19.42■□□□□ 0.7
TNFSF11O14788 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFSF11O14788 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 RARRES2P6-201ENST00000567333 442 ntBASIC19.42■□□□□ 0.7
TNFSF11O14788 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF11O14788 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms