Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
IFRD1O00458 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
IFRD1O00458 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.4■■□□□ 1.02
IFRD1O00458 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.39■■□□□ 1.02
IFRD1O00458 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
IFRD1O00458 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
IFRD1O00458 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.39■■□□□ 1.02
IFRD1O00458 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
IFRD1O00458 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.39■■□□□ 1.01
IFRD1O00458 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.39■■□□□ 1.01
IFRD1O00458 IGHV3-19-201ENST00000521488 291 ntBASIC21.39■■□□□ 1.01
IFRD1O00458 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
IFRD1O00458 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IFRD1O00458 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.39■■□□□ 1.01
IFRD1O00458 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.39■■□□□ 1.01
IFRD1O00458 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
IFRD1O00458 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
IFRD1O00458 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
IFRD1O00458 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.38■■□□□ 1.01
IFRD1O00458 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
IFRD1O00458 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 TSPY26P-201ENST00000476365 1326 ntBASIC21.38■■□□□ 1.01
IFRD1O00458 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
IFRD1O00458 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
IFRD1O00458 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.37■■□□□ 1.01
IFRD1O00458 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.37■■□□□ 1.01
IFRD1O00458 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.37■■□□□ 1.01
IFRD1O00458 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
IFRD1O00458 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.37■■□□□ 1.01
IFRD1O00458 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
IFRD1O00458 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFRD1O00458 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFRD1O00458 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.36■■□□□ 1.01
IFRD1O00458 AC010141.3-201ENST00000456659 717 ntBASIC21.36■■□□□ 1.01
IFRD1O00458 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.36■■□□□ 1.01
IFRD1O00458 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFRD1O00458 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
IFRD1O00458 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
IFRD1O00458 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
IFRD1O00458 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.35■■□□□ 1.01
IFRD1O00458 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.35■■□□□ 1.01
IFRD1O00458 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
IFRD1O00458 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
IFRD1O00458 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.35■■□□□ 1.01
IFRD1O00458 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
IFRD1O00458 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IFRD1O00458 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFRD1O00458 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFRD1O00458 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IFRD1O00458 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFRD1O00458 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.34■■□□□ 1.01
IFRD1O00458 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.34■■□□□ 1.01
IFRD1O00458 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.34■■□□□ 1.01
IFRD1O00458 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.34■■□□□ 1.01
IFRD1O00458 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.34■■□□□ 1.01
IFRD1O00458 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.34■■□□□ 1.01
IFRD1O00458 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFRD1O00458 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
IFRD1O00458 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
IFRD1O00458 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.34■■□□□ 1.01
IFRD1O00458 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFRD1O00458 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFRD1O00458 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.33■■□□□ 1.01
IFRD1O00458 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFRD1O00458 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFRD1O00458 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
IFRD1O00458 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
IFRD1O00458 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
IFRD1O00458 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.33■■□□□ 1.01
IFRD1O00458 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.33■■□□□ 1.01
IFRD1O00458 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
IFRD1O00458 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
IFRD1O00458 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
IFRD1O00458 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.33■■□□□ 1
IFRD1O00458 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms