Protein–RNA interactions for Protein: J3QRE1

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QRE1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.22■□□□□ 0.67
J3QRE1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 AL033527.3-201ENST00000566366 1196 ntBASIC19.22■□□□□ 0.67
J3QRE1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.22■□□□□ 0.67
J3QRE1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.22■□□□□ 0.67
J3QRE1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
J3QRE1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.22■□□□□ 0.67
J3QRE1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.22■□□□□ 0.67
J3QRE1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.21■□□□□ 0.67
J3QRE1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
J3QRE1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.21■□□□□ 0.67
J3QRE1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.21■□□□□ 0.67
J3QRE1 AC026471.6-201ENST00000622954 1905 ntBASIC19.21■□□□□ 0.67
J3QRE1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
J3QRE1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
J3QRE1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
J3QRE1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
J3QRE1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
J3QRE1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.2■□□□□ 0.66
J3QRE1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
J3QRE1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
J3QRE1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.2■□□□□ 0.66
J3QRE1 AC092028.1-203ENST00000608262 953 ntBASIC19.2■□□□□ 0.66
J3QRE1 AL031602.1-201ENST00000633169 911 ntBASIC19.2■□□□□ 0.66
J3QRE1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
J3QRE1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
J3QRE1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.19■□□□□ 0.66
J3QRE1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
J3QRE1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
J3QRE1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.19■□□□□ 0.66
J3QRE1 BX664725.1-201ENST00000438252 379 ntBASIC19.19■□□□□ 0.66
J3QRE1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
J3QRE1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
J3QRE1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
J3QRE1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
J3QRE1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
J3QRE1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.18■□□□□ 0.66
J3QRE1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
J3QRE1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
J3QRE1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
J3QRE1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.18■□□□□ 0.66
J3QRE1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
J3QRE1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
J3QRE1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
J3QRE1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.18■□□□□ 0.66
J3QRE1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
J3QRE1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
J3QRE1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.17■□□□□ 0.66
J3QRE1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
J3QRE1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
J3QRE1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
J3QRE1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
J3QRE1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.17■□□□□ 0.66
J3QRE1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
J3QRE1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.17■□□□□ 0.66
J3QRE1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
J3QRE1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
J3QRE1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
J3QRE1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
J3QRE1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
J3QRE1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
J3QRE1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
J3QRE1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
J3QRE1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.16■□□□□ 0.66
J3QRE1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
J3QRE1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
J3QRE1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
J3QRE1 AC079089.2-201ENST00000531211 1277 ntBASIC19.16■□□□□ 0.66
J3QRE1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
J3QRE1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
J3QRE1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.16■□□□□ 0.66
J3QRE1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.16■□□□□ 0.66
J3QRE1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
J3QRE1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
J3QRE1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
J3QRE1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
J3QRE1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
J3QRE1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
J3QRE1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
J3QRE1 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.15■□□□□ 0.66
J3QRE1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.15■□□□□ 0.66
J3QRE1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
J3QRE1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.15■□□□□ 0.66
J3QRE1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.15■□□□□ 0.66
J3QRE1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms