Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF223E7ERA6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF223E7ERA6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF223E7ERA6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF223E7ERA6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF223E7ERA6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF223E7ERA6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF223E7ERA6 AC009237.3-201ENST00000393279 1427 ntBASIC18.06■□□□□ 0.48
RNF223E7ERA6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF223E7ERA6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF223E7ERA6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF223E7ERA6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF223E7ERA6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF223E7ERA6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF223E7ERA6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF223E7ERA6 MIR4651-201ENST00000582622 73 ntBASIC18.05■□□□□ 0.48
RNF223E7ERA6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF223E7ERA6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF223E7ERA6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF223E7ERA6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF223E7ERA6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF223E7ERA6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF223E7ERA6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF223E7ERA6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 FAM201B-201ENST00000458407 597 ntBASIC18.04■□□□□ 0.48
RNF223E7ERA6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 AP001160.3-201ENST00000601484 763 ntBASIC18.04■□□□□ 0.48
RNF223E7ERA6 MYCNOS-205ENST00000641950 531 ntBASIC18.04■□□□□ 0.48
RNF223E7ERA6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF223E7ERA6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF223E7ERA6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF223E7ERA6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF223E7ERA6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF223E7ERA6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF223E7ERA6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
RNF223E7ERA6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF223E7ERA6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF223E7ERA6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF223E7ERA6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF223E7ERA6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF223E7ERA6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF223E7ERA6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF223E7ERA6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RNF223E7ERA6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.02■□□□□ 0.48
RNF223E7ERA6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF223E7ERA6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF223E7ERA6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RNF223E7ERA6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RNF223E7ERA6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF223E7ERA6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF223E7ERA6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF223E7ERA6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF223E7ERA6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF223E7ERA6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF223E7ERA6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF223E7ERA6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF223E7ERA6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF223E7ERA6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF223E7ERA6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF223E7ERA6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF223E7ERA6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF223E7ERA6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF223E7ERA6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18■□□□□ 0.47
RNF223E7ERA6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF223E7ERA6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18■□□□□ 0.47
RNF223E7ERA6 AC069152.1-201ENST00000438030 544 ntBASIC18■□□□□ 0.47
RNF223E7ERA6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF223E7ERA6 AF201337.1-201ENST00000520239 748 ntBASIC18■□□□□ 0.47
RNF223E7ERA6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF223E7ERA6 AC105036.2-201ENST00000569468 176 ntBASIC18■□□□□ 0.47
RNF223E7ERA6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18■□□□□ 0.47
RNF223E7ERA6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF223E7ERA6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF223E7ERA6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF223E7ERA6 LINC00543-201ENST00000567234 1845 ntBASIC18■□□□□ 0.47
RNF223E7ERA6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18■□□□□ 0.47
RNF223E7ERA6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF223E7ERA6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF223E7ERA6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF223E7ERA6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RNF223E7ERA6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF223E7ERA6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms