Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CGB1A6NKQ9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 AL031602.1-201ENST00000633169 911 ntBASIC17.32■□□□□ 0.36
CGB1A6NKQ9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 AC007375.3-201ENST00000600936 2314 ntBASIC17.32■□□□□ 0.36
CGB1A6NKQ9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CGB1A6NKQ9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 FBXW4P1-201ENST00000426721 2239 ntBASIC17.31■□□□□ 0.36
CGB1A6NKQ9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.31■□□□□ 0.36
CGB1A6NKQ9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 AL356441.2-201ENST00000443009 864 ntBASIC17.3■□□□□ 0.36
CGB1A6NKQ9 MIR3181-201ENST00000578512 73 ntBASIC17.3■□□□□ 0.36
CGB1A6NKQ9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.3■□□□□ 0.36
CGB1A6NKQ9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CGB1A6NKQ9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 AC010542.4-201ENST00000563151 1910 ntBASIC17.28■□□□□ 0.36
CGB1A6NKQ9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CGB1A6NKQ9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CGB1A6NKQ9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms