Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 DUSP8P5-201ENST00000422884 1815 ntBASIC19.29■□□□□ 0.68
NKX2-6A6NCS4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NKX2-6A6NCS4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 AC006970.2-201ENST00000450065 779 ntBASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 SMUG1P1-201ENST00000590640 811 ntBASIC19.27■□□□□ 0.68
NKX2-6A6NCS4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.27■□□□□ 0.67
NKX2-6A6NCS4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NKX2-6A6NCS4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
NKX2-6A6NCS4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NKX2-6A6NCS4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.27■□□□□ 0.67
NKX2-6A6NCS4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
NKX2-6A6NCS4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 AC004812.2-201ENST00000611079 2094 ntBASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 KRT19P1-201ENST00000405746 1186 ntBASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 AC087239.1-201ENST00000622671 572 ntBASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 AC068587.7-201ENST00000641602 218 ntBASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-6A6NCS4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 AC010141.3-201ENST00000456659 717 ntBASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 AC104771.1-201ENST00000603335 964 ntBASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-6A6NCS4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 AL355802.2-201ENST00000402069 882 ntBASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 CROCCP5-201ENST00000436658 830 ntBASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-6A6NCS4 AL353803.4-201ENST00000565882 1934 ntBASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 AC079834.2-201ENST00000609776 1949 ntBASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-6A6NCS4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 AL109923.1-201ENST00000618799 583 ntBASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-6A6NCS4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms