Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TCRBV9S1A1TA0A576 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV9S1A1TA0A576 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 AL117332.1-201ENST00000622628 974 ntBASIC21.83■■□□□ 1.09
TCRBV9S1A1TA0A576 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBV9S1A1TA0A576 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBV9S1A1TA0A576 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TCRBV9S1A1TA0A576 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 AL031602.1-201ENST00000633169 911 ntBASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TCRBV9S1A1TA0A576 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 MIR6724-1-201ENST00000616420 92 ntBASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 MIR6724-2-201ENST00000616483 92 ntBASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 MIR6724-4-201ENST00000617390 92 ntBASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 MIR6724-3-201ENST00000622482 92 ntBASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TCRBV9S1A1TA0A576 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 UNC93B8-201ENST00000511903 705 ntBASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 AL451085.2-201ENST00000605085 799 ntBASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 AC241377.3-202ENST00000626088 1088 ntBASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 AC241585.3-202ENST00000628937 1088 ntBASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 AC245100.8-202ENST00000629247 1058 ntBASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.8■■□□□ 1.08
TCRBV9S1A1TA0A576 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 Z98882.1-201ENST00000622160 2253 ntBASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCRBV9S1A1TA0A576 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 AC133637.1-201ENST00000624115 1537 ntBASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV9S1A1TA0A576 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms