Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV20A0A0B4J274 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 AL117328.2-201ENST00000624617 1940 ntBASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV20A0A0B4J274 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 AP005435.1-201ENST00000529293 1178 ntBASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 AC012414.1-201ENST00000556676 535 ntBASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV20A0A0B4J274 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV20A0A0B4J274 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV20A0A0B4J274 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 AC010525.1-201ENST00000585559 441 ntBASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAV20A0A0B4J274 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
TRAV20A0A0B4J274 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms