Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV4A0A0B4J268 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV4A0A0B4J268 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 AC137767.1-201ENST00000602918 1920 ntBASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 DUX4L19-201ENST00000557448 1267 ntBASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV4A0A0B4J268 C11orf96-202ENST00000528572 1834 ntBASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 LINC00565-201ENST00000562710 2331 ntBASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 MIR3181-201ENST00000578512 73 ntBASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 AC068587.7-201ENST00000641602 218 ntBASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV4A0A0B4J268 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV4A0A0B4J268 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV4A0A0B4J268 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV4A0A0B4J268 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRAV4A0A0B4J268 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms