Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
MTHFRP42898 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 GNRH2-201ENST00000245983 425 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 C17orf64-201ENST00000269127 950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 GNRH2-202ENST00000359100 404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 PGAM1P7-201ENST00000413837 737 ntBASIC12.95□□□□□ -0.34
MTHFRP42898 PYY3-201ENST00000419078 213 ntBASIC12.95□□□□□ -0.34
MTHFRP42898 C12orf71-201ENST00000429849 957 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12.95□□□□□ -0.34
MTHFRP42898 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC12.95□□□□□ -0.34
MTHFRP42898 ACTG1P16-201ENST00000564713 1082 ntBASIC12.95□□□□□ -0.34
MTHFRP42898 MED25-209ENST00000612791 881 ntTSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 AC010271.2-201ENST00000614440 588 ntBASIC12.95□□□□□ -0.34
MTHFRP42898 AC072062.1-201ENST00000617699 351 ntTSL 5 BASIC12.95□□□□□ -0.34
MTHFRP42898 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 KIR3DL2-202ENST00000326321 1877 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC12.95□□□□□ -0.34
MTHFRP42898 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MTHFRP42898 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.94□□□□□ -0.34
MTHFRP42898 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC12.94□□□□□ -0.34
MTHFRP42898 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.94□□□□□ -0.34
MTHFRP42898 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MTHFRP42898 AL021068.1-201ENST00000392097 911 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 KCNK16-203ENST00000425054 1272 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC12.94□□□□□ -0.34
MTHFRP42898 AL589843.2-201ENST00000445872 1262 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 LSP1P3-201ENST00000449530 208 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 LINC01697-204ENST00000458316 1122 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 AC023162.1-201ENST00000505608 474 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 AC104819.2-201ENST00000507181 163 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 ZEB2P1-201ENST00000515048 1141 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 AP000812.3-201ENST00000544535 609 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 DPPA5P4-201ENST00000559021 365 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 AC009086.1-201ENST00000567219 309 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC12.94□□□□□ -0.34
MTHFRP42898 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 AL157791.2-201ENST00000604758 478 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC12.94□□□□□ -0.34
MTHFRP42898 MYO5BP1-201ENST00000610994 1239 ntBASIC12.94□□□□□ -0.34
MTHFRP42898 PINLYP-207ENST00000612042 914 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 LINC01632-202ENST00000617368 533 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
MTHFRP42898 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 ANKRD20A3-201ENST00000611388 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
MTHFRP42898 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 EFHC1-219ENST00000636379 1829 ntTSL 5 BASIC12.94□□□□□ -0.34
MTHFRP42898 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MTHFRP42898 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms