Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC12.97□□□□□ -0.33
SLC1A1P43005 FO393412.1-201ENST00000619841 382 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 CIITA-202ENST00000381835 2344 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 ZNF530-201ENST00000332854 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC12.97□□□□□ -0.33
SLC1A1P43005 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 AC138761.4-202ENST00000577956 2552 ntBASIC12.97□□□□□ -0.33
SLC1A1P43005 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC12.97□□□□□ -0.33
SLC1A1P43005 PIGN-214ENST00000589720 1853 ntTSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SLC1A1P43005 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.97□□□□□ -0.33
SLC1A1P43005 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC12.97□□□□□ -0.33
SLC1A1P43005 BTN3A1-208ENST00000476549 1758 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SLC1A1P43005 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 AF131215.4-201ENST00000526648 1741 ntTSL 5 BASIC12.96□□□□□ -0.33
SLC1A1P43005 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SLC1A1P43005 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SLC1A1P43005 ROPN1-201ENST00000184183 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SLC1A1P43005 BORCS7-201ENST00000339834 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 RN7SKP90-201ENST00000363013 335 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 GALM-202ENST00000410063 1023 ntTSL 3 BASIC12.96□□□□□ -0.33
SLC1A1P43005 RN7SKP297-201ENST00000411270 282 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 YBX1P7-201ENST00000436766 535 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 KRT18P66-201ENST00000452970 1269 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 AC113398.1-201ENST00000464124 406 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.96□□□□□ -0.33
SLC1A1P43005 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 HOXC-AS2-201ENST00000513533 504 ntTSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC12.96□□□□□ -0.33
SLC1A1P43005 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC12.96□□□□□ -0.33
SLC1A1P43005 AL391669.1-201ENST00000619829 285 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 AC020904.3-201ENST00000624199 442 ntBASIC12.96□□□□□ -0.33
SLC1A1P43005 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SLC1A1P43005 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
SLC1A1P43005 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC12.96□□□□□ -0.33
SLC1A1P43005 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SLC1A1P43005 LGR6-201ENST00000255432 3406 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SLC1A1P43005 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SLC1A1P43005 AC092611.1-201ENST00000514269 2565 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SLC1A1P43005 RAB37-212ENST00000528438 1494 ntTSL 2 BASIC12.96□□□□□ -0.34
SLC1A1P43005 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SLC1A1P43005 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SLC1A1P43005 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SLC1A1P43005 CEP57L1-204ENST00000407272 1947 ntTSL 5 BASIC12.96□□□□□ -0.34
SLC1A1P43005 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SLC1A1P43005 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SLC1A1P43005 HDC-202ENST00000543581 2180 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SLC1A1P43005 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 AP003559.1-201ENST00000540906 1831 ntTSL 3 BASIC12.95□□□□□ -0.34
SLC1A1P43005 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 STK26-203ENST00000394335 3017 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC010624.1-201ENST00000527209 1525 ntTSL 2 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.95□□□□□ -0.34
SLC1A1P43005 STRADA-203ENST00000375840 2209 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 AL512383.1-201ENST00000624175 2677 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SLC1A1P43005 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SLC1A1P43005 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC12.95□□□□□ -0.34
SLC1A1P43005 PGAM1P4-201ENST00000397343 750 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC097065.1-201ENST00000425737 517 ntBASIC12.95□□□□□ -0.34
SLC1A1P43005 AC096540.1-201ENST00000436207 661 ntTSL 5 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.95□□□□□ -0.34
SLC1A1P43005 AC022239.3-201ENST00000528629 544 ntTSL 4 BASIC12.95□□□□□ -0.34
SLC1A1P43005 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms