Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC006022.1-201ENST00000425261 388 ntBASIC12.97□□□□□ -0.33
MTHFRP42898 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC12.97□□□□□ -0.33
MTHFRP42898 PHKG1P4-201ENST00000430144 370 ntBASIC12.97□□□□□ -0.33
MTHFRP42898 ELMOD2-206ENST00000511887 751 ntTSL 4 BASIC12.97□□□□□ -0.33
MTHFRP42898 HNRNPA1P69-201ENST00000552536 933 ntBASIC12.97□□□□□ -0.33
MTHFRP42898 ERH-202ENST00000555373 586 ntTSL 2 BASIC12.97□□□□□ -0.33
MTHFRP42898 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC12.97□□□□□ -0.33
MTHFRP42898 AP000553.1-201ENST00000610143 430 ntBASIC12.97□□□□□ -0.33
MTHFRP42898 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
MTHFRP42898 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC12.97□□□□□ -0.33
MTHFRP42898 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC12.97□□□□□ -0.33
MTHFRP42898 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
MTHFRP42898 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
MTHFRP42898 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.97□□□□□ -0.33
MTHFRP42898 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
MTHFRP42898 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MTHFRP42898 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.96□□□□□ -0.33
MTHFRP42898 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
MTHFRP42898 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
MTHFRP42898 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.96□□□□□ -0.33
MTHFRP42898 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
MTHFRP42898 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.96□□□□□ -0.33
MTHFRP42898 C2-211ENST00000469372 1906 ntTSL 2 BASIC12.96□□□□□ -0.33
MTHFRP42898 MOCS1P1-201ENST00000564020 1612 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 NCR1-205ENST00000594765 1612 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 KIR2DP1-201ENST00000415311 1331 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
MTHFRP42898 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 TSPAN16-201ENST00000316737 1040 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
MTHFRP42898 GSTM4-202ENST00000336075 657 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
MTHFRP42898 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 HNRNPA1P6-201ENST00000394002 1117 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 LINC01135-201ENST00000419531 996 ntTSL 4 BASIC12.96□□□□□ -0.33
MTHFRP42898 HMGB3P4-201ENST00000428776 514 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 PGAM1P2-201ENST00000436071 725 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 ARL15-205ENST00000507646 578 ntTSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC12.96□□□□□ -0.33
MTHFRP42898 MIR2277-201ENST00000515916 93 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC12.96□□□□□ -0.33
MTHFRP42898 AC007923.3-201ENST00000578645 292 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 AC011458.2-201ENST00000603937 207 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 AC007032.1-201ENST00000609281 847 ntBASIC12.96□□□□□ -0.33
MTHFRP42898 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 AC244230.1-201ENST00000623463 498 ntTSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 FAM25BP-203ENST00000624613 404 ntTSL 3 BASIC12.96□□□□□ -0.33
MTHFRP42898 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.96□□□□□ -0.33
MTHFRP42898 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MTHFRP42898 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.96□□□□□ -0.33
MTHFRP42898 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 AC010336.1-201ENST00000539278 4739 ntBASIC12.96□□□□□ -0.34
MTHFRP42898 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 SLC16A7-216ENST00000552432 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 LINC00664-201ENST00000596203 1742 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
MTHFRP42898 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.96□□□□□ -0.34
MTHFRP42898 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
MTHFRP42898 LINC00563-201ENST00000566370 1400 ntBASIC12.96□□□□□ -0.34
MTHFRP42898 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms