Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 APOL3-201ENST00000349314 2117 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TFAM-201ENST00000373895 973 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 SNAPC5-203ENST00000395589 749 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 AC083873.1-201ENST00000421179 1099 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 RN7SL111P-201ENST00000468841 285 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 RN7SL105P-201ENST00000475661 299 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 FPGT-205ENST00000482102 561 ntTSL 4 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 AC090820.1-201ENST00000519722 591 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 AC104117.4-201ENST00000521486 847 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 IKBKE-202ENST00000579827 678 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 CHMP2A-206ENST00000600118 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 FLJ30679-201ENST00000624773 1980 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 FAM170A-206ENST00000613773 1374 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 PCDHA9-201ENST00000378122 6900 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 POM121L7P-201ENST00000329949 2404 ntBASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NPIPA3F8WFD2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CTAGE7P-201ENST00000435712 2436 ntBASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 MEOX1-203ENST00000393661 1206 ntTSL 3 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 IL32-204ENST00000396887 789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 CYP4F60P-201ENST00000439449 549 ntBASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 OR2A15P-201ENST00000463814 900 ntBASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 RN7SL300P-201ENST00000582522 318 ntBASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AC092301.1-201ENST00000601618 764 ntTSL 5 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 MIR6165-201ENST00000614803 84 ntBASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
NPIPA3F8WFD2 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms