Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC133561.1-201ENST00000568600 2415 ntBASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC027612.3-201ENST00000413684 1047 ntBASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.79■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC080038.3-201ENST00000623346 1952 ntBASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AL358852.1-201ENST00000623174 1268 ntBASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF11AQ9Y6Q6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF11AQ9Y6Q6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF11AQ9Y6Q6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.77■■□□□ 1.88
TNFRSF11AQ9Y6Q6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TNFRSF11AQ9Y6Q6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.77■■□□□ 1.88
TNFRSF11AQ9Y6Q6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.76■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
TNFRSF11AQ9Y6Q6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.76■■□□□ 1.87
TNFRSF11AQ9Y6Q6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.76■■□□□ 1.87
TNFRSF11AQ9Y6Q6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AL354811.1-201ENST00000610286 706 ntBASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TNFRSF11AQ9Y6Q6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 YBX1P1-201ENST00000445822 960 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4L2-201ENST00000561772 1275 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 TPRG1LP1-201ENST00000598702 760 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4L6-201ENST00000626483 1275 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4L1-201ENST00000627662 1275 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4L8-201ENST00000629013 1275 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4L3-201ENST00000630187 1275 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4L7-201ENST00000630678 1275 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 DUX4L5-201ENST00000630834 1275 ntBASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.74■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TNFRSF11AQ9Y6Q6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AC079089.2-201ENST00000531211 1277 ntBASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 KRT18P61-201ENST00000585825 1298 ntBASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TNFRSF11AQ9Y6Q6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms