Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CYP46A1Q9Y6A2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CYP46A1Q9Y6A2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CYP46A1Q9Y6A2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CYP46A1Q9Y6A2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.81■■□□□ 1.72
CYP46A1Q9Y6A2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 OR2I1P-207ENST00000453522 948 ntBASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 AC131281.2-201ENST00000520478 145 ntBASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CYP46A1Q9Y6A2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.79■■□□□ 1.72
CYP46A1Q9Y6A2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CYP46A1Q9Y6A2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 SERBP1P1-201ENST00000396021 1160 ntBASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 DUX4L19-201ENST00000557448 1267 ntBASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 SYT6-210ENST00000641643 1587 ntBASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CYP46A1Q9Y6A2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
CYP46A1Q9Y6A2 FBXW4P1-201ENST00000426721 2239 ntBASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 AL138724.1-201ENST00000606771 1088 ntBASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
CYP46A1Q9Y6A2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 AC079089.2-201ENST00000531211 1277 ntBASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 AC068587.7-201ENST00000641602 218 ntBASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CYP46A1Q9Y6A2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms