Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHGC4Q9Y5F7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 IRS3P-201ENST00000223076 1006 ntBASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGC4Q9Y5F7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 MIR572-201ENST00000384983 95 ntBASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGC4Q9Y5F7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC4Q9Y5F7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC4Q9Y5F7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC4Q9Y5F7 AC079089.2-201ENST00000531211 1277 ntBASIC21.95■■□□□ 1.1
PCDHGC4Q9Y5F7 AC080038.3-201ENST00000623346 1952 ntBASIC21.95■■□□□ 1.1
PCDHGC4Q9Y5F7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
PCDHGC4Q9Y5F7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGC4Q9Y5F7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 AC127496.7-201ENST00000625110 1798 ntBASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGC4Q9Y5F7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGC4Q9Y5F7 AC012676.1-201ENST00000574705 1949 ntBASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 AC105233.4-201ENST00000642045 216 ntBASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 AC139530.1-201ENST00000575312 1977 ntBASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 LINC00526-201ENST00000581067 1875 ntBASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGC4Q9Y5F7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC4Q9Y5F7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGC4Q9Y5F7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC4Q9Y5F7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
PCDHGC4Q9Y5F7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHGC4Q9Y5F7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms