Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 AC092437.1-201ENST00000624794 1048 ntBASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHB9Q9Y5E1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 AC123595.1-201ENST00000440769 1046 ntBASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB9Q9Y5E1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PCDHB9Q9Y5E1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHB9Q9Y5E1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHB9Q9Y5E1 AP005435.1-201ENST00000529293 1178 ntBASIC22.08■■□□□ 1.13
PCDHB9Q9Y5E1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.08■■□□□ 1.13
PCDHB9Q9Y5E1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHB9Q9Y5E1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 AC068587.7-201ENST00000641602 218 ntBASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHB9Q9Y5E1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 AC027612.3-201ENST00000413684 1047 ntBASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHB9Q9Y5E1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHB9Q9Y5E1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 IGHV3-19-201ENST00000521488 291 ntBASIC22.04■■□□□ 1.12
PCDHB9Q9Y5E1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB9Q9Y5E1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHB9Q9Y5E1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHB9Q9Y5E1 AC068473.5-201ENST00000616428 2072 ntBASIC22.03■■□□□ 1.12
PCDHB9Q9Y5E1 AC087742.1-201ENST00000575880 1738 ntBASIC22.03■■□□□ 1.12
PCDHB9Q9Y5E1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms