Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
NINLQ9Y2I6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
NINLQ9Y2I6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC29.93■■■□□ 2.38
NINLQ9Y2I6 ABHD17AP1-201ENST00000358206 933 ntBASIC29.92■■■□□ 2.38
NINLQ9Y2I6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC29.92■■■□□ 2.38
NINLQ9Y2I6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.92■■■□□ 2.38
NINLQ9Y2I6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
NINLQ9Y2I6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
NINLQ9Y2I6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
NINLQ9Y2I6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
NINLQ9Y2I6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 AC079089.2-201ENST00000531211 1277 ntBASIC29.91■■■□□ 2.38
NINLQ9Y2I6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 AC009237.3-201ENST00000393279 1427 ntBASIC29.91■■■□□ 2.38
NINLQ9Y2I6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 AC005224.4-201ENST00000583262 1652 ntBASIC29.91■■■□□ 2.38
NINLQ9Y2I6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NINLQ9Y2I6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 AP004607.4-201ENST00000530158 1459 ntBASIC29.9■■■□□ 2.38
NINLQ9Y2I6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 HLA-L-209ENST00000420110 1011 ntBASIC29.9■■■□□ 2.38
NINLQ9Y2I6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC29.9■■■□□ 2.38
NINLQ9Y2I6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
NINLQ9Y2I6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
NINLQ9Y2I6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
NINLQ9Y2I6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
NINLQ9Y2I6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.89■■■□□ 2.37
NINLQ9Y2I6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
NINLQ9Y2I6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
NINLQ9Y2I6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 AC004911.1-201ENST00000416316 871 ntBASIC29.88■■■□□ 2.37
NINLQ9Y2I6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 AC004854.2-201ENST00000608450 1441 ntBASIC29.88■■■□□ 2.37
NINLQ9Y2I6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
NINLQ9Y2I6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 COX20-201ENST00000366528 568 ntTSL 2 BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 AC006015.1-201ENST00000429970 570 ntBASIC29.87■■■□□ 2.37
NINLQ9Y2I6 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.87■■■□□ 2.37
NINLQ9Y2I6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC29.87■■■□□ 2.37
NINLQ9Y2I6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
NINLQ9Y2I6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NINLQ9Y2I6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NINLQ9Y2I6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.86■■■□□ 2.37
NINLQ9Y2I6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC29.86■■■□□ 2.37
NINLQ9Y2I6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
NINLQ9Y2I6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.86■■■□□ 2.37
NINLQ9Y2I6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC29.85■■■□□ 2.37
NINLQ9Y2I6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NINLQ9Y2I6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC29.84■■■□□ 2.37
NINLQ9Y2I6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC29.84■■■□□ 2.37
NINLQ9Y2I6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
NINLQ9Y2I6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
NINLQ9Y2I6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.84■■■□□ 2.37
NINLQ9Y2I6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC29.84■■■□□ 2.37
NINLQ9Y2I6 AC079140.4-201ENST00000507448 529 ntBASIC29.84■■■□□ 2.37
NINLQ9Y2I6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.84■■■□□ 2.37
NINLQ9Y2I6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC29.83■■■□□ 2.37
NINLQ9Y2I6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC29.83■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms