Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
TRAK1Q9UPV9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
TRAK1Q9UPV9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRAK1Q9UPV9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRAK1Q9UPV9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.67■■■□□ 2.5
TRAK1Q9UPV9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRAK1Q9UPV9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRAK1Q9UPV9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.67■■■□□ 2.5
TRAK1Q9UPV9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRAK1Q9UPV9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRAK1Q9UPV9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRAK1Q9UPV9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.66■■■□□ 2.5
TRAK1Q9UPV9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
TRAK1Q9UPV9 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.66■■■□□ 2.5
TRAK1Q9UPV9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 GXYLT1P5-201ENST00000614548 1189 ntBASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 BID-214ENST00000617586 542 ntTSL 5 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
TRAK1Q9UPV9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 ESRRAP2-201ENST00000418437 1549 ntBASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRAK1Q9UPV9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC30.64■■■□□ 2.49
TRAK1Q9UPV9 AC005224.4-201ENST00000583262 1652 ntBASIC30.63■■■□□ 2.49
TRAK1Q9UPV9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TRAK1Q9UPV9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC30.63■■■□□ 2.49
TRAK1Q9UPV9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TRAK1Q9UPV9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRAK1Q9UPV9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TRAK1Q9UPV9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
TRAK1Q9UPV9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRAK1Q9UPV9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TRAK1Q9UPV9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.62■■■□□ 2.49
TRAK1Q9UPV9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TRAK1Q9UPV9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TRAK1Q9UPV9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
TRAK1Q9UPV9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
TRAK1Q9UPV9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TRAK1Q9UPV9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
TRAK1Q9UPV9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TRAK1Q9UPV9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC30.6■■■□□ 2.49
TRAK1Q9UPV9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TRAK1Q9UPV9 AC026185.1-201ENST00000445748 174 ntBASIC30.6■■■□□ 2.49
TRAK1Q9UPV9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
TRAK1Q9UPV9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRAK1Q9UPV9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC30.59■■■□□ 2.49
TRAK1Q9UPV9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRAK1Q9UPV9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRAK1Q9UPV9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TRAK1Q9UPV9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC30.59■■■□□ 2.49
TRAK1Q9UPV9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRAK1Q9UPV9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 CROCCP5-201ENST00000436658 830 ntBASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 AC011767.1-201ENST00000617410 1153 ntBASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
TRAK1Q9UPV9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 MAP2K4P1-201ENST00000438453 1195 ntBASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
TRAK1Q9UPV9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRAK1Q9UPV9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRAK1Q9UPV9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRAK1Q9UPV9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRAK1Q9UPV9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms