Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 DUX4L1-201ENST00000627662 1275 ntBASIC24.98■■□□□ 1.59
DDX41Q9UJV9 DUX4L8-201ENST00000629013 1275 ntBASIC24.98■■□□□ 1.59
DDX41Q9UJV9 DUX4L3-201ENST00000630187 1275 ntBASIC24.98■■□□□ 1.59
DDX41Q9UJV9 DUX4L7-201ENST00000630678 1275 ntBASIC24.98■■□□□ 1.59
DDX41Q9UJV9 DUX4L5-201ENST00000630834 1275 ntBASIC24.98■■□□□ 1.59
DDX41Q9UJV9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.98■■□□□ 1.59
DDX41Q9UJV9 ABCB10P4-201ENST00000566803 2184 ntBASIC24.98■■□□□ 1.59
DDX41Q9UJV9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX41Q9UJV9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
DDX41Q9UJV9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX41Q9UJV9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.97■■□□□ 1.59
DDX41Q9UJV9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX41Q9UJV9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.97■■□□□ 1.59
DDX41Q9UJV9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX41Q9UJV9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX41Q9UJV9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.96■■□□□ 1.59
DDX41Q9UJV9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.96■■□□□ 1.59
DDX41Q9UJV9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
DDX41Q9UJV9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 C1orf229-201ENST00000623686 2258 ntBASIC24.95■■□□□ 1.58
DDX41Q9UJV9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.95■■□□□ 1.58
DDX41Q9UJV9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
DDX41Q9UJV9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 KRT18P5-201ENST00000436075 1291 ntBASIC24.93■■□□□ 1.58
DDX41Q9UJV9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.93■■□□□ 1.58
DDX41Q9UJV9 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 AL353803.4-201ENST00000565882 1934 ntBASIC24.92■■□□□ 1.58
DDX41Q9UJV9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX41Q9UJV9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 SLC25A24-204ENST00000569674 2357 ntBASIC24.91■■□□□ 1.58
DDX41Q9UJV9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX41Q9UJV9 AC004687.1-201ENST00000579003 1625 ntBASIC24.9■■□□□ 1.58
DDX41Q9UJV9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 CCDC92B-201ENST00000575506 885 ntBASIC24.9■■□□□ 1.58
DDX41Q9UJV9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DDX41Q9UJV9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms