Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LRFN1Q9P244 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN1Q9P244 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN1Q9P244 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.97■□□□□ 0.79
LRFN1Q9P244 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
LRFN1Q9P244 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.97■□□□□ 0.79
LRFN1Q9P244 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN1Q9P244 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN1Q9P244 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN1Q9P244 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 AL137784.2-201ENST00000607332 1000 ntBASIC19.96■□□□□ 0.79
LRFN1Q9P244 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 AC093323.1-202ENST00000635031 2045 ntBASIC19.96■□□□□ 0.79
LRFN1Q9P244 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN1Q9P244 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN1Q9P244 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN1Q9P244 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRFN1Q9P244 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN1Q9P244 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LRFN1Q9P244 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.95■□□□□ 0.78
LRFN1Q9P244 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN1Q9P244 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN1Q9P244 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LRFN1Q9P244 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN1Q9P244 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN1Q9P244 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN1Q9P244 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN1Q9P244 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
LRFN1Q9P244 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN1Q9P244 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN1Q9P244 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LRFN1Q9P244 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN1Q9P244 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN1Q9P244 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.94■□□□□ 0.78
LRFN1Q9P244 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN1Q9P244 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.94■□□□□ 0.78
LRFN1Q9P244 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.94■□□□□ 0.78
LRFN1Q9P244 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.94■□□□□ 0.78
LRFN1Q9P244 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN1Q9P244 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN1Q9P244 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN1Q9P244 LINC01960-201ENST00000563759 1884 ntBASIC19.94■□□□□ 0.78
LRFN1Q9P244 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.94■□□□□ 0.78
LRFN1Q9P244 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN1Q9P244 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN1Q9P244 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN1Q9P244 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN1Q9P244 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LRFN1Q9P244 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN1Q9P244 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
LRFN1Q9P244 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.91■□□□□ 0.78
LRFN1Q9P244 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.91■□□□□ 0.78
LRFN1Q9P244 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.91■□□□□ 0.78
LRFN1Q9P244 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.91■□□□□ 0.78
LRFN1Q9P244 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.91■□□□□ 0.78
LRFN1Q9P244 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN1Q9P244 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN1Q9P244 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.91■□□□□ 0.78
LRFN1Q9P244 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN1Q9P244 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN1Q9P244 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRFN1Q9P244 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 AC092437.1-201ENST00000624794 1048 ntBASIC19.9■□□□□ 0.78
LRFN1Q9P244 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRFN1Q9P244 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms