Protein–RNA interactions for Protein: Q9NXJ0

MS4A12, Membrane-spanning 4-domains subfamily A member 12, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A12Q9NXJ0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MS4A12Q9NXJ0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 EDA-201ENST00000338901 1233 ntBASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 AC133561.4-201ENST00000566112 224 ntBASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 AC087239.1-201ENST00000622671 572 ntBASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 AC087742.1-201ENST00000575880 1738 ntBASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 AC127496.7-201ENST00000625110 1798 ntBASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MS4A12Q9NXJ0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MS4A12Q9NXJ0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 AP005435.1-201ENST00000529293 1178 ntBASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 CA15P2-201ENST00000611168 834 ntBASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MS4A12Q9NXJ0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 AC233992.3-201ENST00000607491 485 ntBASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MS4A12Q9NXJ0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 AC010525.1-201ENST00000585559 441 ntBASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 AL355001.2-201ENST00000620617 1191 ntBASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MS4A12Q9NXJ0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MS4A12Q9NXJ0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.64■□□□□ 0.9
MS4A12Q9NXJ0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.64■□□□□ 0.9
MS4A12Q9NXJ0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MS4A12Q9NXJ0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A12Q9NXJ0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A12Q9NXJ0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MS4A12Q9NXJ0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms