Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CISHQ9NSE2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CISHQ9NSE2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CISHQ9NSE2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CISHQ9NSE2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CISHQ9NSE2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CISHQ9NSE2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CISHQ9NSE2 AC079089.2-201ENST00000531211 1277 ntBASIC23.25■■□□□ 1.31
CISHQ9NSE2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.25■■□□□ 1.31
CISHQ9NSE2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.25■■□□□ 1.31
CISHQ9NSE2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.25■■□□□ 1.31
CISHQ9NSE2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 AC242852.2-201ENST00000615738 1807 ntBASIC23.24■■□□□ 1.31
CISHQ9NSE2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CISHQ9NSE2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CISHQ9NSE2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CISHQ9NSE2 TSPY26P-201ENST00000476365 1326 ntBASIC23.24■■□□□ 1.31
CISHQ9NSE2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.24■■□□□ 1.31
CISHQ9NSE2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CISHQ9NSE2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CISHQ9NSE2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CISHQ9NSE2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CISHQ9NSE2 LINC00526-201ENST00000581067 1875 ntBASIC23.22■■□□□ 1.31
CISHQ9NSE2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.22■■□□□ 1.31
CISHQ9NSE2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CISHQ9NSE2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.22■■□□□ 1.31
CISHQ9NSE2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CISHQ9NSE2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.22■■□□□ 1.31
CISHQ9NSE2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CISHQ9NSE2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.22■■□□□ 1.31
CISHQ9NSE2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.22■■□□□ 1.31
CISHQ9NSE2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CISHQ9NSE2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CISHQ9NSE2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CISHQ9NSE2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.21■■□□□ 1.31
CISHQ9NSE2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.21■■□□□ 1.31
CISHQ9NSE2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.21■■□□□ 1.31
CISHQ9NSE2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CISHQ9NSE2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CISHQ9NSE2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CISHQ9NSE2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 ECEL1P1-201ENST00000373592 1742 ntBASIC23.2■■□□□ 1.3
CISHQ9NSE2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CISHQ9NSE2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.2■■□□□ 1.3
CISHQ9NSE2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.19■■□□□ 1.3
CISHQ9NSE2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.19■■□□□ 1.3
CISHQ9NSE2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CISHQ9NSE2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CISHQ9NSE2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CISHQ9NSE2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CISHQ9NSE2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CISHQ9NSE2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.18■■□□□ 1.3
CISHQ9NSE2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.18■■□□□ 1.3
CISHQ9NSE2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms