Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.79■■□□□ 1.08
TM9SF3Q9HD45 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 AC006015.1-201ENST00000429970 570 ntBASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 AC068587.7-201ENST00000641602 218 ntBASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
TM9SF3Q9HD45 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 AC137761.2-201ENST00000561729 223 ntBASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 AC145350.3-201ENST00000569033 163 ntBASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 AC080038.1-201ENST00000611274 1154 ntBASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.77■■□□□ 1.08
TM9SF3Q9HD45 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TM9SF3Q9HD45 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.77■■□□□ 1.07
TM9SF3Q9HD45 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
TM9SF3Q9HD45 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 AC016769.1-201ENST00000409132 1010 ntBASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF3Q9HD45 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 BX005040.4-201ENST00000637145 1518 ntBASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 AC079834.2-201ENST00000609776 1949 ntBASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.75■■□□□ 1.07
TM9SF3Q9HD45 ABCB10P4-201ENST00000566803 2184 ntBASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 AP004607.4-201ENST00000530158 1459 ntBASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.74■■□□□ 1.07
TM9SF3Q9HD45 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 AC004854.2-201ENST00000608450 1441 ntBASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 HLA-L-209ENST00000420110 1011 ntBASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 AC010141.3-201ENST00000456659 717 ntBASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 AC087239.1-201ENST00000622671 572 ntBASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TM9SF3Q9HD45 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 AL353803.4-201ENST00000565882 1934 ntBASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TM9SF3Q9HD45 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms