Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF304Q9HCX3 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.62■□□□□ 0.89
ZNF304Q9HCX3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF304Q9HCX3 LINC01960-201ENST00000563759 1884 ntBASIC20.62■□□□□ 0.89
ZNF304Q9HCX3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF304Q9HCX3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF304Q9HCX3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF304Q9HCX3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 AC034268.1-201ENST00000441047 882 ntBASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF304Q9HCX3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF304Q9HCX3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ZNF304Q9HCX3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.58■□□□□ 0.88
ZNF304Q9HCX3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ZNF304Q9HCX3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
ZNF304Q9HCX3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 SMUG1P1-201ENST00000590640 811 ntBASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 LINC02228-203ENST00000641970 1355 ntBASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF304Q9HCX3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF304Q9HCX3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 BX005040.4-201ENST00000637145 1518 ntBASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 AL162430.1-201ENST00000480705 870 ntBASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF304Q9HCX3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF304Q9HCX3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF304Q9HCX3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms