Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.45■■□□□ 1.98
CHMP4BQ9H444 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 AP005435.1-201ENST00000529293 1178 ntBASIC27.44■■□□□ 1.98
CHMP4BQ9H444 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CHMP4BQ9H444 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
CHMP4BQ9H444 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CHMP4BQ9H444 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 AC008406.3-201ENST00000620001 1374 ntBASIC27.41■■□□□ 1.98
CHMP4BQ9H444 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CHMP4BQ9H444 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CHMP4BQ9H444 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 AC010525.1-201ENST00000585559 441 ntBASIC27.39■■□□□ 1.98
CHMP4BQ9H444 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.39■■□□□ 1.98
CHMP4BQ9H444 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.97
CHMP4BQ9H444 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 UNC93B3-201ENST00000308076 687 ntBASIC27.38■■□□□ 1.97
CHMP4BQ9H444 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHMP4BQ9H444 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 OXCT2P1-201ENST00000447263 1535 ntBASIC27.37■■□□□ 1.97
CHMP4BQ9H444 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC27.37■■□□□ 1.97
CHMP4BQ9H444 OR7E47P-201ENST00000546390 1422 ntBASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms