Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 AC080038.3-201ENST00000623346 1952 ntBASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC68Q9H2F9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 DUX4L19-201ENST00000557448 1267 ntBASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC68Q9H2F9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 MIR3181-201ENST00000578512 73 ntBASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 AC092053.2-201ENST00000640557 1818 ntBASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 SYT6-210ENST00000641643 1587 ntBASIC21.7■■□□□ 1.06
CCDC68Q9H2F9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC68Q9H2F9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 AC131281.2-201ENST00000520478 145 ntBASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 MIR4466-201ENST00000606121 54 ntBASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC68Q9H2F9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 AC139530.1-201ENST00000575312 1977 ntBASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC68Q9H2F9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC68Q9H2F9 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms