Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 MIR6724-2-201ENST00000616483 92 ntBASIC23.87■■□□□ 1.41
VPS16Q9H269 MIR6724-4-201ENST00000617390 92 ntBASIC23.87■■□□□ 1.41
VPS16Q9H269 MIR6724-3-201ENST00000622482 92 ntBASIC23.87■■□□□ 1.41
VPS16Q9H269 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.87■■□□□ 1.41
VPS16Q9H269 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
VPS16Q9H269 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.87■■□□□ 1.41
VPS16Q9H269 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
VPS16Q9H269 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
VPS16Q9H269 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.86■■□□□ 1.41
VPS16Q9H269 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS16Q9H269 AL117332.1-201ENST00000622628 974 ntBASIC23.86■■□□□ 1.41
VPS16Q9H269 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VPS16Q9H269 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
VPS16Q9H269 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS16Q9H269 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS16Q9H269 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS16Q9H269 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
VPS16Q9H269 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.85■■□□□ 1.41
VPS16Q9H269 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.85■■□□□ 1.41
VPS16Q9H269 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS16Q9H269 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS16Q9H269 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS16Q9H269 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
VPS16Q9H269 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS16Q9H269 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
VPS16Q9H269 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.84■■□□□ 1.41
VPS16Q9H269 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
VPS16Q9H269 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.84■■□□□ 1.41
VPS16Q9H269 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS16Q9H269 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
VPS16Q9H269 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS16Q9H269 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS16Q9H269 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.83■■□□□ 1.41
VPS16Q9H269 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS16Q9H269 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
VPS16Q9H269 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS16Q9H269 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.83■■□□□ 1.41
VPS16Q9H269 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.83■■□□□ 1.41
VPS16Q9H269 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
VPS16Q9H269 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
VPS16Q9H269 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
VPS16Q9H269 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
VPS16Q9H269 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS16Q9H269 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS16Q9H269 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
VPS16Q9H269 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
VPS16Q9H269 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS16Q9H269 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.81■■□□□ 1.4
VPS16Q9H269 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.81■■□□□ 1.4
VPS16Q9H269 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.81■■□□□ 1.4
VPS16Q9H269 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
VPS16Q9H269 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
VPS16Q9H269 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.81■■□□□ 1.4
VPS16Q9H269 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.81■■□□□ 1.4
VPS16Q9H269 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS16Q9H269 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS16Q9H269 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS16Q9H269 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.8■■□□□ 1.4
VPS16Q9H269 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS16Q9H269 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms